RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	CBY3	A6NI87	242 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	SCGB1D1	O95968	90 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	MCRIP2	Q9BUT9	160 aa	Known RBP	10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	PHLDA3	Q9Y5J5	127 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	HSBP1L1	C9JCN9	74 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	INS	P01308	110 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	FAM104B	Q5XKR9	115 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	GTSCR1	Q86UQ5	136 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	LINC01587	Q99440	93 aa		10.6	□□□□□ -0.71
PDE1B-206	ENST00000550285	ANK2	Q01484	3957 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	IGHV4-4	A0A075B6R2	117 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	GAS8-AS1	O95177	125 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	RNF185	Q96GF1	192 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	TMEM191A	Q9H0A3	160 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	JPT2	Q9H910	190 aa		10.59	□□□□□ -0.71
PDE1B-206	ENST00000550285	SMKR1	H3BMG3	65 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	MRPL51	Q4U2R6	128 aa	Known RBP	10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285		Q6ZWC4	215 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	RCHY1	Q96PM5	261 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	MED14OS	P0DP75	135 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	AZU1	P20160	251 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	CACNG7	P62955	275 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	TEX43	Q6ZNM6	134 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	C18orf32	Q8TCD1	76 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	C9orf85	Q96MD7	179 aa		10.58	□□□□□ -0.72
PDE1B-206	ENST00000550285	SAMD10	Q9BYL1	202 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285		D6R8Y8	96 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	WIPF1	O43516	503 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	NCR2	O95944	276 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	PTTG1IP	P53801	180 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	C14orf178	Q8N769	122 aa	Predicted RBP	10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	MDFI	Q99750	246 aa		10.57	□□□□□ -0.72
PDE1B-206	ENST00000550285	NBEAL2	Q6ZNJ1	2754 aa		10.56	□□□□□ -0.72
PDE1B-206	ENST00000550285	CCL25	O15444	150 aa		10.56	□□□□□ -0.72
PDE1B-206	ENST00000550285	GATA1	P15976	413 aa	Predicted RBP	10.56	□□□□□ -0.72
PDE1B-206	ENST00000550285	TRGV11	A0A075B6L2	103 aa		10.55	□□□□□ -0.72
PDE1B-206	ENST00000550285	TRAV26-2	A0A0B4J265	109 aa		10.55	□□□□□ -0.72
PDE1B-206	ENST00000550285	KRTAP10-11	P60412	298 aa		10.55	□□□□□ -0.72
PDE1B-206	ENST00000550285	UBE2V1	Q13404	147 aa		10.55	□□□□□ -0.72
PDE1B-206	ENST00000550285	CSNK1G2-AS1	Q8NCQ2	148 aa		10.55	□□□□□ -0.72
PDE1B-206	ENST00000550285	NXPH4	O95158	308 aa		10.54	□□□□□ -0.72
PDE1B-206	ENST00000550285	C11orf72	Q8NBR9	251 aa		10.54	□□□□□ -0.72
PDE1B-206	ENST00000550285		A0A087WWL8	130 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	CKS2	P33552	79 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	AMT	P48728	403 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	URB1-AS1	Q96HZ7	61 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285		U3KQK5	164 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	PRELID3A	Q96N28	172 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	CSTL1	Q9H114	145 aa		10.53	□□□□□ -0.72
PDE1B-206	ENST00000550285	NPY	P01303	97 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	ZNF876P	Q49A33	203 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	MORN3	Q6PF18	240 aa	Predicted RBP	10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	LINC00467	Q9BRT7	94 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	KIF25-AS1	Q9Y6Z4	181 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	LINC00315	P59091	139 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	ORMDL3	Q8N138	153 aa		10.52	□□□□□ -0.73
PDE1B-206	ENST00000550285	LOC389332	A0A1B0GUA5	103 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285		G3V4G9	280 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	MGP	P08493	103 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	NIT1	Q86X76	327 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	AP1S3	Q96PC3	154 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	DPH3P1	Q9H4G8	78 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	DNAH3	Q8TD57	4116 aa		10.51	□□□□□ -0.73
PDE1B-206	ENST00000550285	PMCH	P20382	165 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	MAJIN	Q3KP22	176 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	ZNF415	Q09FC8	603 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	BATF	Q16520	125 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	FAM74A4	Q5TZK3	123 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	VAMP8	Q9BV40	100 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	C1QTNF4	Q9BXJ3	329 aa		10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	MRPL16	Q9NX20	251 aa	Known RBP	10.5	□□□□□ -0.73
PDE1B-206	ENST00000550285	RNASEK	Q6P5S7	137 aa	Known RBP	10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	FAM19A2	Q8N3H0	131 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285		Q8N976	141 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	PRSS47	A8MTI9	375 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	CRYGD	P07320	174 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	IGHV4-30-4	P0DP06	118 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	SYT8	Q8NBV8	401 aa		10.49	□□□□□ -0.73
PDE1B-206	ENST00000550285	TMEM238	C9JI98	176 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	HSBP1	O75506	76 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	TNFRSF6B	O95407	300 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	IFI27	P40305	119 aa	Predicted RBP	10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	KRTDAP	P60985	99 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	PMCHL1	Q16048	86 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	NRAC	Q8N912	160 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	NACA	E9PAV3	2078 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	IGHV3-73	A0A0B4J1V6	119 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	PLAC8L1	A1L4L8	177 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285		M0R2P5	195 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	EGFEM1P	Q0D2K5	195 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	STPG4	Q8N801	248 aa		10.48	□□□□□ -0.73
PDE1B-206	ENST00000550285	SMIM17	P0DL12	118 aa		10.47	□□□□□ -0.73
PDE1B-206	ENST00000550285	IL17D	Q8TAD2	202 aa		10.47	□□□□□ -0.73
PDE1B-206	ENST00000550285	RPL39L	Q96EH5	51 aa	Known RBP	10.47	□□□□□ -0.73
PDE1B-206	ENST00000550285	COX11	Q9Y6N1	276 aa		10.47	□□□□□ -0.73
PDE1B-206	ENST00000550285	C3orf79	P0CE67	100 aa		10.46	□□□□□ -0.73
PDE1B-206	ENST00000550285	TMEM263	Q8WUH6	116 aa	Known RBP	10.46	□□□□□ -0.73
PDE1B-206	ENST00000550285	RASL10A	Q92737	203 aa		10.46	□□□□□ -0.73
PDE1B-206	ENST00000550285	UQCR10	Q9UDW1	63 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms