RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-220ENST00000549686 ZFP2Q6ZN57 461 aa12.43□□□□□ -0.42
LETMD1-220ENST00000549686 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
LETMD1-220ENST00000549686 KIF25-AS1Q9Y6Z4 181 aa12.43□□□□□ -0.42
LETMD1-220ENST00000549686 TRGV2A0A075B6R0 118 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 CRYGDP07320 174 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 FABP9Q0Z7S8 132 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 CFAP126Q5VTH2 177 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 OR4C5Q8NGB2 326 aa12.42□□□□□ -0.42
LETMD1-220ENST00000549686 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 GAGE7O76087 117 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 PPBPP02775 128 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 RAB4AP20338 218 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 SLAQ13239 276 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 AMN1Q8IY45 258 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 POM121L12Q8N7R1 296 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 MUC4Q99102 2169 aa12.41□□□□□ -0.42
LETMD1-220ENST00000549686 A0A087WWL8 130 aa12.4□□□□□ -0.42
LETMD1-220ENST00000549686 TRGC2P03986 189 aa12.4□□□□□ -0.42
LETMD1-220ENST00000549686 FAM74A4Q5TZK3 123 aa12.4□□□□□ -0.42
LETMD1-220ENST00000549686 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
LETMD1-220ENST00000549686 JPT2Q9H910 190 aa12.4□□□□□ -0.42
LETMD1-220ENST00000549686 DEFB4AO15263 64 aa12.39□□□□□ -0.43
LETMD1-220ENST00000549686 MGPP08493 103 aa12.39□□□□□ -0.43
LETMD1-220ENST00000549686 LINC00315P59091 139 aa12.39□□□□□ -0.43
LETMD1-220ENST00000549686 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
LETMD1-220ENST00000549686 SAMD10Q9BYL1 202 aa12.39□□□□□ -0.43
LETMD1-220ENST00000549686 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 PPP1R17O96001 155 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 DEFB130BP0DP73 79 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 DEFB130AP0DP74 79 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 DAD1P61803 113 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
LETMD1-220ENST00000549686 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 LAMTOR2Q9Y2Q5 125 aa12.38□□□□□ -0.43
LETMD1-220ENST00000549686 F5H697 171 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 H7C1H1 209 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 CKS2P33552 79 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 ZNF56Q15929 161 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 U3KQK5 164 aa12.37□□□□□ -0.43
LETMD1-220ENST00000549686 A0A0J9YWU9 116 aa12.36□□□□□ -0.43
LETMD1-220ENST00000549686 PHOX2AO14813 284 aa12.36□□□□□ -0.43
LETMD1-220ENST00000549686 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 D6R8Y8 96 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 RAB5BP61020 215 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 ZNF479Q96JC4 524 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
LETMD1-220ENST00000549686 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
LETMD1-220ENST00000549686 ATP5G1P05496 136 aa12.34□□□□□ -0.43
LETMD1-220ENST00000549686 KIAA1644Q3SXP7 199 aa12.34□□□□□ -0.43
LETMD1-220ENST00000549686 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
LETMD1-220ENST00000549686 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
LETMD1-220ENST00000549686 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
LETMD1-220ENST00000549686 PRELID3AQ96N28 172 aa12.33□□□□□ -0.44
LETMD1-220ENST00000549686 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
LETMD1-220ENST00000549686 TRBV10-1A0A0K0K1A3 114 aa12.32□□□□□ -0.44
LETMD1-220ENST00000549686 TRBV6-4A0A1B0GX49 114 aa12.32□□□□□ -0.44
LETMD1-220ENST00000549686 M0QY20 66 aa12.32□□□□□ -0.44
LETMD1-220ENST00000549686 GATA1P15976 413 aaPredicted RBP12.32□□□□□ -0.44
LETMD1-220ENST00000549686 SRIP30626 198 aa12.32□□□□□ -0.44
LETMD1-220ENST00000549686 TRAV26-2A0A0B4J265 109 aa12.31□□□□□ -0.44
LETMD1-220ENST00000549686 FHL2Q14192 279 aa12.31□□□□□ -0.44
LETMD1-220ENST00000549686 C12orf74Q32Q52 190 aa12.31□□□□□ -0.44
LETMD1-220ENST00000549686 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
LETMD1-220ENST00000549686 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
LETMD1-220ENST00000549686 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
LETMD1-220ENST00000549686 NCR2O95944 276 aa12.3□□□□□ -0.44
LETMD1-220ENST00000549686 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
LETMD1-220ENST00000549686 NRACQ8N912 160 aa12.3□□□□□ -0.44
LETMD1-220ENST00000549686 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
LETMD1-220ENST00000549686 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
LETMD1-220ENST00000549686 DNAH9Q9NYC9 4486 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 TRBV6-5A0A0K0K1A5 114 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 K7EQD1 137 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BKO60814 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BJP06899 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BOP23527 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BBP33778 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BDP58876 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BCP62807 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 RHOHQ15669 191 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST2H2BEQ16778 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BHQ93079 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BNQ99877 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HIST1H2BMQ99879 126 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 MAP1LC3AQ9H492 121 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
LETMD1-220ENST00000549686 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
LETMD1-220ENST00000549686 NPYP01303 97 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms