RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 Q6ZWC4 215 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 TMEM70Q9BUB7 260 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 AGRNO00468 2067 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 IGHV1-24A0A0C4DH33 117 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 SMKR1H3BMG3 65 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 CIDEAO60543 219 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 NCR2O95944 276 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 HBDP02042 147 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 KIF25-AS1Q9Y6Z4 181 aa9.83□□□□□ -0.84
PTCH1-215ENST00000547672 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 WIPF1O43516 503 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 FCER1GP30273 86 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 SUMO2P61956 95 aaKnown RBP9.82□□□□□ -0.84
PTCH1-215ENST00000547672 ORMDL2Q53FV1 153 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 NRACQ8N912 160 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 ST20Q9HBF5 79 aa9.82□□□□□ -0.84
PTCH1-215ENST00000547672 VCYO14598 125 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
PTCH1-215ENST00000547672 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 LAGE3Q14657 143 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
PTCH1-215ENST00000547672 LGALS9BQ3B8N2 356 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
PTCH1-215ENST00000547672 C16orf74Q96GX8 76 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-215ENST00000547672 F8P00451 2351 aa9.81□□□□□ -0.84
PTCH1-215ENST00000547672 KIR2DL5BA0A0G2JN68 375 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 KIR2DL5BA0A0G2JPC4 375 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 SMIM9A6NGZ8 99 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 TSTD3H0UI37 97 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 KIR2DL5AQ8N109 375 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 C1orf158Q8N1D5 194 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 KIR2DL5BQ8NHK3 375 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 RASL10AQ92737 203 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
PTCH1-215ENST00000547672 ATP5LO75964 103 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 CRYGDP07320 174 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
PTCH1-215ENST00000547672 APOC4P55056 127 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 LINC00315P59091 139 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 PKIAP61925 76 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 ZNF56Q15929 161 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 KRTAP24-1Q3LI83 254 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 ZFP2Q6ZN57 461 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
PTCH1-215ENST00000547672 IGHV3OR16-12A0A075B7B8 117 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 A0A087WWL8 130 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 TRAV26-2A0A0B4J265 109 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 SYS1-DBNDD2H3BUS1 97 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
PTCH1-215ENST00000547672 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
PTCH1-215ENST00000547672 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.85
PTCH1-215ENST00000547672 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-215ENST00000547672 DNAJC30Q96LL9 226 aa9.77□□□□□ -0.85
PTCH1-215ENST00000547672 VAMP8Q9BV40 100 aa9.77□□□□□ -0.85
PTCH1-215ENST00000547672 MUC4Q99102 2169 aa9.77□□□□□ -0.85
PTCH1-215ENST00000547672 RS1O15537 224 aa9.76□□□□□ -0.85
PTCH1-215ENST00000547672 SPRY2O43597 315 aa9.76□□□□□ -0.85
PTCH1-215ENST00000547672 NUDT3O95989 172 aa9.76□□□□□ -0.85
PTCH1-215ENST00000547672 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-215ENST00000547672 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
PTCH1-215ENST00000547672 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
PTCH1-215ENST00000547672 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
PTCH1-215ENST00000547672 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 M0QY20 66 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 AZU1P20160 251 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 CSNK1G2-AS1Q8NCQ2 148 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 JPT2Q9H910 190 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
PTCH1-215ENST00000547672 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
PTCH1-215ENST00000547672 GIG44P09565 113 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-215ENST00000547672 IGLL1P15814 213 aa9.74□□□□□ -0.85
PTCH1-215ENST00000547672 POLR2KP53803 58 aaKnown RBP9.74□□□□□ -0.85
PTCH1-215ENST00000547672 CFAP126Q5VTH2 177 aa9.74□□□□□ -0.85
PTCH1-215ENST00000547672 OR4C5Q8NGB2 326 aa9.74□□□□□ -0.85
PTCH1-215ENST00000547672 OVOL2Q9BRP0 275 aa9.74□□□□□ -0.85
PTCH1-215ENST00000547672 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 PCP4L1A6NKN8 68 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 GAS8-AS1O95177 125 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 RHOHQ15669 191 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
PTCH1-215ENST00000547672 RPL39LQ96EH5 51 aaKnown RBP9.73□□□□□ -0.85
PTCH1-215ENST00000547672 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms