RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 RRN3P1Q2M238 152 aa12.46□□□□□ -0.41
BRF1-208ENST00000546997 PRO0461Q9UI25 63 aa12.46□□□□□ -0.41
BRF1-208ENST00000546997 SELENOKQ9Y6D0 94 aa12.46□□□□□ -0.41
BRF1-208ENST00000546997 CKS1BP61024 79 aa12.45□□□□□ -0.42
BRF1-208ENST00000546997 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
BRF1-208ENST00000546997 C11orf44Q8N8P7 122 aa12.45□□□□□ -0.42
BRF1-208ENST00000546997 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
BRF1-208ENST00000546997 PRB4P10163 310 aaPredicted RBP12.45□□□□□ -0.42
BRF1-208ENST00000546997 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
BRF1-208ENST00000546997 K7ERJ3 54 aa12.44□□□□□ -0.42
BRF1-208ENST00000546997 TNFRSF6BO95407 300 aa12.44□□□□□ -0.42
BRF1-208ENST00000546997 PLNP26678 52 aa12.44□□□□□ -0.42
BRF1-208ENST00000546997 VCX2Q9H322 139 aa12.44□□□□□ -0.42
BRF1-208ENST00000546997 FXYD7P58549 80 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
BRF1-208ENST00000546997 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
BRF1-208ENST00000546997 CD28P10747 220 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 TCTAP57738 103 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 PROK1P58294 105 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 TMEM158Q8WZ71 300 aa12.43□□□□□ -0.42
BRF1-208ENST00000546997 IGLV2-18A0A075B6J9 118 aa12.42□□□□□ -0.42
BRF1-208ENST00000546997 SMKR1H3BMG3 65 aa12.42□□□□□ -0.42
BRF1-208ENST00000546997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.42□□□□□ -0.42
BRF1-208ENST00000546997 DEFB136Q30KP8 78 aa12.42□□□□□ -0.42
BRF1-208ENST00000546997 ETDBQ3ZM63 59 aa12.42□□□□□ -0.42
BRF1-208ENST00000546997 ASCL2Q99929 193 aa12.42□□□□□ -0.42
BRF1-208ENST00000546997 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 A0A087WX48 190 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 H3BMG7 143 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 FABP5P3A8MUU1 101 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 IGFL4Q6B9Z1 124 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 METTL26Q96S19 204 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 U3KQE9 123 aa12.41□□□□□ -0.42
BRF1-208ENST00000546997 IGHV4OR15-8A0A075B7B6 117 aa12.4□□□□□ -0.42
BRF1-208ENST00000546997 A0A087WW49 117 aa12.4□□□□□ -0.42
BRF1-208ENST00000546997 IGHV3-66A0A0C4DH42 116 aa12.4□□□□□ -0.42
BRF1-208ENST00000546997 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
BRF1-208ENST00000546997 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
BRF1-208ENST00000546997 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
BRF1-208ENST00000546997 NDUFA4O00483 81 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
BRF1-208ENST00000546997 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 ZNF575Q86XF7 245 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 WFDC3Q8IUB2 231 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 C4orf3Q8WVX3 66 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
BRF1-208ENST00000546997 C1QTNF4Q9BXJ3 329 aa12.39□□□□□ -0.43
BRF1-208ENST00000546997 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 GHRHP01286 108 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 FOXI1Q12951 378 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 LAGE3Q14657 143 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 DUX3Q96PT4 197 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 KRTAP10-3P60369 221 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
BRF1-208ENST00000546997 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
BRF1-208ENST00000546997 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
BRF1-208ENST00000546997 APOMO95445 188 aa12.37□□□□□ -0.43
BRF1-208ENST00000546997 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
BRF1-208ENST00000546997 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
BRF1-208ENST00000546997 SLC50A1Q9BRV3 221 aa12.37□□□□□ -0.43
BRF1-208ENST00000546997 H7C1H1 209 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 K7EMI3 77 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 EDN2P20800 178 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 ZNF80P51504 273 aaPredicted RBP12.36□□□□□ -0.43
BRF1-208ENST00000546997 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 GEMIN7Q9H840 131 aaKnown RBP12.36□□□□□ -0.43
BRF1-208ENST00000546997 MYMXA0A1B0GTQ4 84 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
BRF1-208ENST00000546997 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
BRF1-208ENST00000546997 F8VRH5 84 aa12.35□□□□□ -0.43
BRF1-208ENST00000546997 CRYBA4P53673 196 aa12.35□□□□□ -0.43
BRF1-208ENST00000546997 SLURP1P55000 103 aa12.35□□□□□ -0.43
BRF1-208ENST00000546997 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
BRF1-208ENST00000546997 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 ORM1P02763 201 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 SYNJ2BPP57105 145 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 MSRB1Q9NZV6 116 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 VWFP04275 2813 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 TRAV8-2A0A0B4J237 113 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 OR11H12B2RN74 326 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
BRF1-208ENST00000546997 OR11H2Q8NH07 326 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 Q8TAT8 98 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms