RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FANCD2OSQ96PS1 177 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 LINC01548A6NM66 108 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 PROP1O75360 226 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 CITED2Q99967 270 aaPredicted RBP9.85□□□□□ -0.83
CHD4-211ENST00000544484 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 RPL39P62891 51 aaKnown RBP9.85□□□□□ -0.83
CHD4-211ENST00000544484 ZFP2Q6ZN57 461 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 K7EP34 96 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 IGHV3-33P01772 117 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 IGHV3-30-3P0DP02 117 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
CHD4-211ENST00000544484 TAL2Q16559 108 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
CHD4-211ENST00000544484 TRAV12-1A0A0B4J245 112 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 K7EP13 123 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 Q6ZPA2 131 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 K7EQD1 137 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 TDRG1Q3Y452 100 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 PLXNB1O43157 2135 aa9.84□□□□□ -0.83
CHD4-211ENST00000544484 SLC25A29Q8N8R3 303 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 DSCAML1Q8TD84 2053 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 OBSL1O75147 1896 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 K7EMI3 77 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 DEFB135Q30KP9 77 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 TMEM61Q8N0U2 210 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 C1orf43Q9BWL3 253 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 ATP5G1P05496 136 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 ANKRD39Q53RE8 183 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 TMEM131Q92545 1883 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 LMO4P61968 165 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 GPHB5Q86YW7 130 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
CHD4-211ENST00000544484 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 UBE2BP63146 152 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 ZNF106Q9H2Y7 1883 aaKnown RBP9.82□□□□□ -0.84
CHD4-211ENST00000544484 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 F8W1H4 67 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 K7EMT4 169 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
CHD4-211ENST00000544484 BRWD1-AS2P59051 145 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 DEFB105AQ8NG35 78 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 CCL25O15444 150 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 MRPL23Q16540 153 aaKnown RBP9.81□□□□□ -0.84
CHD4-211ENST00000544484 A6NDX4 124 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 SIVA1O15304 175 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 RS1O15537 224 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
CHD4-211ENST00000544484 PRO3102Q9H379 93 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 MDFICQ9P1T7 246 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 CFC1P0CG37 223 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 IGKV1D-37A0A075B6S9 117 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
CHD4-211ENST00000544484 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
CHD4-211ENST00000544484 DSCAMO60469 2012 aa9.8□□□□□ -0.84
CHD4-211ENST00000544484 KIAA1549LQ6ZVL6 1849 aa9.8□□□□□ -0.84
CHD4-211ENST00000544484 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
CHD4-211ENST00000544484 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
CHD4-211ENST00000544484 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
CHD4-211ENST00000544484 DAND5Q8N907 189 aa9.8□□□□□ -0.84
CHD4-211ENST00000544484 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
CHD4-211ENST00000544484 ZNF503Q96F45 646 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 CAMK2N2Q96S95 79 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 CRIP3Q6Q6R5 217 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 NAV3Q8IVL0 2385 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 DNAJC9-AS1A6NH13 148 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 RBMY1FQ15415 496 aaKnown RBP9.79□□□□□ -0.84
CHD4-211ENST00000544484 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
CHD4-211ENST00000544484 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
CHD4-211ENST00000544484 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
CHD4-211ENST00000544484 C4orf3Q8WVX3 66 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
CHD4-211ENST00000544484 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 PRORYQ9H606 182 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 TANC2Q9HCD6 1990 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 P0C879 139 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 MYCNOSP40205 109 aa9.78□□□□□ -0.84
CHD4-211ENST00000544484 LINC01545Q5VT33 79 aa9.77□□□□□ -0.84
CHD4-211ENST00000544484 IGHG4P01861 327 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 COX7A2LO14548 114 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 CCL18P55774 89 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 MYO9AB2RTY4 2548 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 A0A0J9YX75 114 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms