RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 M0R1W7 72 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 GNRH2O43555 120 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 GPHB5Q86YW7 130 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
AC005840.4-201ENST00000541242 SNCGO76070 127 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 HERVK_113P61574 105 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 C16orf92Q96LL3 132 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 IGHV3-64A0A075B6Q5 118 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 G3V318 75 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 BRI3O95415 125 aa11.19□□□□□ -0.62
AC005840.4-201ENST00000541242 TEX49A0A1B0GTD5 131 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 VMO1Q7Z5L0 202 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 Q8N1Y9 231 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 AMELXQ99217 191 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 JPT2Q9H910 190 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 BEX4Q9NWD9 120 aaPredicted RBP11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 IGHV4-39P01824 125 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 UBTD1Q9HAC8 227 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 USP24Q9UPU5 2620 aa11.18□□□□□ -0.62
AC005840.4-201ENST00000541242 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 IGIPA6NJ69 53 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 PMVKQ15126 192 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 ASIPP42127 132 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 Q8N6K4 173 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 ZFAND2AQ8N6M9 145 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 COL12A1Q99715 3063 aa11.17□□□□□ -0.62
AC005840.4-201ENST00000541242 J3QQQ9 107 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 TTC32Q5I0X7 151 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 Q8N9W7 124 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 METTL26Q96S19 204 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 F6UB75 175 aa11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE12JA6NER3 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE7O76087 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GAGE4Q13068 117 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 Q1RN00 199 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 IFITM1P13164 125 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 GNLYP22749 145 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 VPS13CQ709C8 3753 aa11.15□□□□□ -0.62
AC005840.4-201ENST00000541242 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 FAM110DQ8TAY7 271 aaPredicted RBP11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 A0A087WWL8 130 aa11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
AC005840.4-201ENST00000541242 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
AC005840.4-201ENST00000541242 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
AC005840.4-201ENST00000541242 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
AC005840.4-201ENST00000541242 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
AC005840.4-201ENST00000541242 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
AC005840.4-201ENST00000541242 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 LINC00315P59091 139 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 CFAP46Q8IYW2 2715 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
AC005840.4-201ENST00000541242 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 F5H697 171 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 SUMO4Q6EEV6 95 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 BPESC1Q9GZL8 116 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 LMO4P61968 165 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 ZNF256Q9Y2P7 627 aaPredicted RBP11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 KIF25-AS1Q9Y6Z4 181 aa11.11□□□□□ -0.63
AC005840.4-201ENST00000541242 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 EBI3Q14213 229 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 U3KQE9 123 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 SDHAF1A6NFY7 115 aa11.1□□□□□ -0.63
AC005840.4-201ENST00000541242 TRIAP1O43715 76 aa11.09□□□□□ -0.63
AC005840.4-201ENST00000541242 ATXN8Q156A1 80 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms