RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	ZNF56	Q15929	161 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	C9orf116	Q5BN46	136 aa	Predicted RBP	0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	DEFB132	Q7Z7B7	95 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	SPTSSB	Q8NFR3	76 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	TMEM203	Q969S6	136 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	C2orf88	Q9BSF0	95 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	AGPAT4-IT1	Q9H0P7	198 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	RERGL	Q9H628	205 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	COA4	Q9NYJ1	87 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	ROS1	P08922	2347 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	SPAG17	Q6Q759	2223 aa		0.88	□□□□□ -2.27
CARS2-223	ENST00000540785	MYH9	P35579	1960 aa	Known RBP	0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	PIGBOS1	A0A0B4J2F0	54 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	LOC100130705	A0A1B0GUX0	176 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	MIF4GD	A9UHW6	222 aa	Known RBP	0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	NPC2	P61916	151 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	C10orf82	Q8WW14	230 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	GNG8	Q9UK08	70 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	SERP1	Q9Y6X1	66 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	ZNF142	P52746	1687 aa	Predicted RBP	0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	AKAP11	Q9UKA4	1901 aa		0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	AFDN	P55196	1824 aa	Known RBP	0.87	□□□□□ -2.27
CARS2-223	ENST00000540785	BCORL1	Q5H9F3	1711 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	ZNF518A	Q6AHZ1	1483 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	CNTRL	Q7Z7A1	2325 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	TRBV10-3	A0A0K0K1G6	114 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	MCRIP1	C9JLW8	97 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	CBLN1	P23435	193 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	SPINT3	P49223	89 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	KRTAP10-4	P60372	401 aa	Predicted RBP	0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	KLKP1	Q107X0	134 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785		Q6AWC8	147 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785		Q8N6K4	173 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	PP6455	Q8WZ26	134 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	BET1L	Q9NYM9	111 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	SPTB	P11277	2137 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	CIT	O14578	2027 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	MED12	Q93074	2177 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	BCL9L	Q86UU0	1499 aa		0.86	□□□□□ -2.27
CARS2-223	ENST00000540785	SPAAR	A0A1B0GVQ0	90 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785		F6UZH7	168 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	IFNG	P01579	166 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	S100A1	P23297	94 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	KRTAP5-9	P26371	169 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	BTG2	P78543	158 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	WHAMMP3	Q1A5X7	153 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785		Q56UQ5	140 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	FAM74A4	Q5TZK3	123 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	C12orf73	Q69YU5	71 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	C20orf197	Q8N268	126 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	LSM10	Q969L4	123 aa	Known RBP	0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	DSCR8	Q96T75	97 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	TMEM14B	Q9NUH8	114 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	SCN3B	Q9NY72	215 aa		0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	MUC22	E2RYF6	1773 aa	Predicted RBP	0.85	□□□□□ -2.27
CARS2-223	ENST00000540785	KTN1	Q86UP2	1357 aa	Known RBP	0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	RBAKDN	A6NC62	111 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	APOC4-APOC2	K7ER74	178 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	LY6G6C	O95867	125 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	APOC2	P02655	101 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	CCL3L1	P16619	93 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	FXYD6P3	P58550	94 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	TPPP2	P59282	170 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	RBM3	P98179	157 aa	Known RBP	0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	CATR1	Q13166	79 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	SPINK13	Q1W4C9	94 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	KRTAP5-7	Q6L8G8	165 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	C10orf99	Q6UWK7	81 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	C4orf33	Q8N1A6	199 aa		0.84	□□□□□ -2.27
CARS2-223	ENST00000540785	OTOGL	Q3ZCN5	2332 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	LAMB1	P07942	1786 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	GNG4	P50150	75 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	MRPS10	P82664	201 aa	Known RBP	0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	SSBP1	Q04837	148 aa	Known RBP	0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	INSL4	Q14641	139 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	MRPL54	Q6P161	138 aa	Known RBP	0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	COX7B2	Q8TF08	81 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	PLAC4	Q8WY50	150 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	CUL7	Q14999	1698 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	FAM135A	Q9P2D6	1515 aa		0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	RBBP6	Q7Z6E9	1792 aa	Known RBP	0.83	□□□□□ -2.28
CARS2-223	ENST00000540785	LAMA4	Q16363	1823 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	A2ML1	A8K2U0	1454 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	MYOM2	P54296	1465 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	IFT140	Q96RY7	1462 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	NRXN2	Q9P2S2	1712 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	TRAV13-2	A0A0B4J235	113 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	CORT	O00230	105 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	UBE2D1	P51668	147 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	ELOF1	P60002	83 aa	Known RBP	0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	C9orf153	Q5TBE3	101 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785		Q8N8P6	123 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	PPP3R2	Q96LZ3	170 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785		V9GYV3	84 aa		0.82	□□□□□ -2.28
CARS2-223	ENST00000540785	CASKIN1	Q8WXD9	1431 aa		0.81	□□□□□ -2.28
CARS2-223	ENST00000540785	NWD2	Q9ULI1	1742 aa		0.81	□□□□□ -2.28
CARS2-223	ENST00000540785	TRIOBP	Q9H2D6	2365 aa		0.81	□□□□□ -2.28
CARS2-223	ENST00000540785	ZDBF2	Q9HCK1	2354 aa		0.81	□□□□□ -2.28
CARS2-223	ENST00000540785		K7EIL1	84 aa		0.81	□□□□□ -2.28
CARS2-223	ENST00000540785	S100P	P25815	95 aa		0.81	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms