RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 SYS1-DBNDD2H3BUS1 97 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 J3KRW8 73 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 RHODO00212 210 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 WIPF1O43516 503 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 ATP5LO75964 103 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
C2CD3-215ENST00000540452 LGALS9BQ3B8N2 356 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 LGALS9CQ6DKI2 356 aa6.1□□□□□ -1.43
C2CD3-215ENST00000540452 A0A096LNJ9 63 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 CBY3A6NI87 242 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 KNCNA6PVL3 124 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 M0R2P5 195 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 LINC00315P59091 139 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 LAGE3Q14657 143 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 LBHQ53QV2 105 aaPredicted RBP6.09□□□□□ -1.43
C2CD3-215ENST00000540452 Q6ZQT7 251 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 TMEM158Q8WZ71 300 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 RASL10AQ92737 203 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 AGRNO00468 2067 aa6.09□□□□□ -1.43
C2CD3-215ENST00000540452 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 TRAV9-2A0A087WT02 112 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 TRBV27A0A0K0K1C4 114 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1BA6NDE4 496 aaKnown RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1EA6NEQ0 496 aaKnown RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 NCR2O95944 276 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 IGKV3-20P01619 116 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1DP0C7P1 496 aaKnown RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 DDTP30046 118 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 NSUN5P1Q3KNT7 163 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 ZNF876PQ49A33 203 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 ZFP2Q6ZN57 461 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 C14orf178Q8N769 122 aaPredicted RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 C11orf44Q8N8P7 122 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 ST20Q9HBF5 79 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 C19orf73Q9NVV2 129 aa6.08□□□□□ -1.44
C2CD3-215ENST00000540452 NSD1Q96L73 2696 aaPredicted RBP6.08□□□□□ -1.44
C2CD3-215ENST00000540452 SMKR1H3BMG3 65 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 VCYO14598 125 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 CRYGDP07320 174 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 NPSP0C0P6 89 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 POLR2KP53803 58 aaKnown RBP6.07□□□□□ -1.44
C2CD3-215ENST00000540452 RHOHQ15669 191 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 C11orf72Q8NBR9 251 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 WFDC9Q8NEX5 89 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 KIR2DL4Q99706 377 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 MDFICQ9P1T7 246 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
C2CD3-215ENST00000540452 SORL1Q92673 2214 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 LOC389332A0A1B0GUA5 103 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 PCP4L1A6NKN8 68 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 HSBP1L1C9JCN9 74 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1A1P0DJD3 496 aaKnown RBP6.06□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1CP0DJD4 496 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 KRTAP10-3P60369 221 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 SSTP61278 116 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 DAZ2Q13117 558 aaKnown RBP6.06□□□□□ -1.44
C2CD3-215ENST00000540452 RBMY1FQ15415 496 aaKnown RBP6.06□□□□□ -1.44
C2CD3-215ENST00000540452 GTSCR1Q86UQ5 136 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 TOMM6Q96B49 74 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 C16orf74Q96GX8 76 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 LINC01587Q99440 93 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 MIEN1Q9BRT3 115 aa6.06□□□□□ -1.44
C2CD3-215ENST00000540452 TIMM8BQ9Y5J9 83 aaPredicted RBP6.06□□□□□ -1.44
C2CD3-215ENST00000540452 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 M0QY20 66 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 MGPP08493 103 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 DEFA6Q01524 100 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 SUMO4Q6EEV6 95 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 UFSP1Q6NVU6 142 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 RNASE8Q8TDE3 154 aaKnown RBP6.05□□□□□ -1.44
C2CD3-215ENST00000540452 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 ZMAT5Q9UDW3 170 aaKnown RBP6.05□□□□□ -1.44
C2CD3-215ENST00000540452 SELENOKQ9Y6D0 94 aa6.05□□□□□ -1.44
C2CD3-215ENST00000540452 CUBNO60494 3623 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 SMIM9A6NGZ8 99 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 LINC00587B1AMM8 73 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.04□□□□□ -1.44
C2CD3-215ENST00000540452 RS1O15537 224 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 CRYBA4P53673 196 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 ZNF56Q15929 161 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 SPATA45Q537H7 98 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 ZNF705AQ6ZN79 300 aaPredicted RBP6.04□□□□□ -1.44
C2CD3-215ENST00000540452 ERASQ7Z444 233 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 C1orf158Q8N1D5 194 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 PMCHL2Q9BQD1 86 aa6.04□□□□□ -1.44
C2CD3-215ENST00000540452 TMEM208Q9BTX3 173 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms