RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HHLA3Q9XRX5 114 aa11.56□□□□□ -0.56
MKS1-204ENST00000537529 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
MKS1-204ENST00000537529 SIVA1O15304 175 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 PLNP26678 52 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 C2orf66Q6UXQ4 117 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 SPAG8Q99932 426 aaPredicted RBP11.55□□□□□ -0.56
MKS1-204ENST00000537529 MRPL35Q9NZE8 188 aaKnown RBP11.55□□□□□ -0.56
MKS1-204ENST00000537529 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 VCYO14598 125 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 ZNF56Q15929 161 aa11.55□□□□□ -0.56
MKS1-204ENST00000537529 MUC4Q99102 2169 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 TRBV6-5A0A0K0K1A5 114 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 H7C1H1 209 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 FHL3Q13643 280 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 CD300EQ496F6 205 aaPredicted RBP11.54□□□□□ -0.56
MKS1-204ENST00000537529 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
MKS1-204ENST00000537529 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 CRYGDP07320 174 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 CD28P10747 220 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 ZNF876PQ49A33 203 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 C16orf95Q9H693 158 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 COX11Q9Y6N1 276 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 MXRA5Q9NR99 2828 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 CCL24O00175 119 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 ZNF124Q15973 351 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 ZC2HC1BQ5TFG8 222 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 TEX15Q9BXT5 2789 aa11.53□□□□□ -0.56
MKS1-204ENST00000537529 ITPR3Q14573 2671 aa11.52□□□□□ -0.56
MKS1-204ENST00000537529 F8VRH5 84 aa11.52□□□□□ -0.57
MKS1-204ENST00000537529 TMEM97Q5BJF2 176 aa11.52□□□□□ -0.57
MKS1-204ENST00000537529 ERASQ7Z444 233 aa11.52□□□□□ -0.57
MKS1-204ENST00000537529 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
MKS1-204ENST00000537529 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
MKS1-204ENST00000537529 SDHAF1A6NFY7 115 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
MKS1-204ENST00000537529 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
MKS1-204ENST00000537529 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
MKS1-204ENST00000537529 M0QY20 66 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 HSD52Q0P140 79 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
MKS1-204ENST00000537529 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 SEC11AP67812 179 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 LINC01006Q8NI28 216 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 HTN1P15515 57 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 ZNF418Q8TF45 676 aaPredicted RBP11.5□□□□□ -0.57
MKS1-204ENST00000537529 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
MKS1-204ENST00000537529 LINC00467Q9BRT7 94 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
MKS1-204ENST00000537529 INSP01308 110 aa11.49□□□□□ -0.57
MKS1-204ENST00000537529 TENM4Q6N022 2769 aa11.49□□□□□ -0.57
MKS1-204ENST00000537529 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 MORN3Q6PF18 240 aaPredicted RBP11.48□□□□□ -0.57
MKS1-204ENST00000537529 TAX1BP3O14907 124 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 NPSP0C0P6 89 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 Q6ZVH6 145 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 HIGD1BQ9P298 99 aa11.48□□□□□ -0.57
MKS1-204ENST00000537529 M0R2P5 195 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 RHOHQ15669 191 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 ODF3L2Q3SX64 289 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 PTH2Q96A98 100 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 AGRNO00468 2067 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 PRSS29PA6NIE9 313 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 LINC01587Q99440 93 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
MKS1-204ENST00000537529 A8MWV9 139 aa11.46□□□□□ -0.57
MKS1-204ENST00000537529 HILS1P60008 231 aa11.46□□□□□ -0.57
MKS1-204ENST00000537529 TIMM17AQ99595 171 aa11.46□□□□□ -0.57
MKS1-204ENST00000537529 A6NDN8 102 aa11.45□□□□□ -0.58
MKS1-204ENST00000537529 IGIPA6NJ69 53 aa11.45□□□□□ -0.58
MKS1-204ENST00000537529 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
MKS1-204ENST00000537529 NSUN5P1Q3KNT7 163 aa11.45□□□□□ -0.58
MKS1-204ENST00000537529 STHQ8IWL8 128 aa11.45□□□□□ -0.58
MKS1-204ENST00000537529 KMT2BQ9UMN6 2715 aaPredicted RBP11.45□□□□□ -0.58
MKS1-204ENST00000537529 NDUFA7O95182 113 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 SPXQ9BT56 116 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms