RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 A6NJY4 79 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 FOXI2Q6ZQN5 318 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 KIR2DL4Q99706 377 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 IGKV3-20P01619 116 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 ZFP2Q6ZN57 461 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 NEGR1Q7Z3B1 354 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 OR5A1Q8NGJ0 315 aa13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 NAA38Q9BRA0 125 aaKnown RBP13.31□□□□□ -0.28
PABPC1L-217ENST00000537323 CR1P17927 2039 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 TRAV12-2A0A075B6T6 113 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 MYMXA0A1B0GTQ4 84 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 FABP2P12104 132 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 SAMD5Q5TGI4 173 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
PABPC1L-217ENST00000537323 E9PLD3 99 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 PAPPA-AS1Q5QFB9 102 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 Q8N1Y9 231 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 MDFICQ9P1T7 246 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 ANKRD17O75179 2603 aaKnown RBP13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 SDHAF1A6NFY7 115 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 RIPPLY3P57055 190 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 SPCS1Q9Y6A9 102 aa13.29□□□□□ -0.28
PABPC1L-217ENST00000537323 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
PABPC1L-217ENST00000537323 PRB1P04280 392 aa13.28□□□□□ -0.28
PABPC1L-217ENST00000537323 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
PABPC1L-217ENST00000537323 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
PABPC1L-217ENST00000537323 TRGV11A0A075B6L2 103 aa13.27□□□□□ -0.28
PABPC1L-217ENST00000537323 DUX5Q96PT3 197 aa13.27□□□□□ -0.28
PABPC1L-217ENST00000537323 HIST1H4GQ99525 98 aa13.27□□□□□ -0.28
PABPC1L-217ENST00000537323 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.28
PABPC1L-217ENST00000537323 PMVKQ15126 192 aa13.27□□□□□ -0.29
PABPC1L-217ENST00000537323 TCTEX1D4Q5JR98 221 aa13.27□□□□□ -0.29
PABPC1L-217ENST00000537323 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.29
PABPC1L-217ENST00000537323 AMTNQ6UX39 209 aa13.27□□□□□ -0.29
PABPC1L-217ENST00000537323 TRBV7-3A0A075B6L6 115 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 TSHBP01222 138 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 CRYGDP07320 174 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 ZNF56Q15929 161 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 PRADC1Q9BSG0 188 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 AGRNO00468 2067 aa13.26□□□□□ -0.29
PABPC1L-217ENST00000537323 M0QY20 66 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 TRPT1Q86TN4 253 aaKnown RBP13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 K7ERJ3 54 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 RHOHQ15669 191 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 Q8N2B8 174 aa13.25□□□□□ -0.29
PABPC1L-217ENST00000537323 SCGB1A1P11684 91 aa13.24□□□□□ -0.29
PABPC1L-217ENST00000537323 HERVK_113P61574 105 aa13.24□□□□□ -0.29
PABPC1L-217ENST00000537323 DEFB113Q30KQ7 82 aa13.24□□□□□ -0.29
PABPC1L-217ENST00000537323 ZNF256Q9Y2P7 627 aaPredicted RBP13.24□□□□□ -0.29
PABPC1L-217ENST00000537323 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 MORN3Q6PF18 240 aaPredicted RBP13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 MYO18BQ8IUG5 2567 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 C11orf86A6NJI1 115 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 A8MTW9 85 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 Q5PR19 223 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 ACACBO00763 2458 aa13.23□□□□□ -0.29
PABPC1L-217ENST00000537323 SLURP1P55000 103 aa13.22□□□□□ -0.29
PABPC1L-217ENST00000537323 SCGB2A2Q13296 93 aa13.22□□□□□ -0.29
PABPC1L-217ENST00000537323 BBC3Q96PG8 261 aaPredicted RBP13.22□□□□□ -0.29
PABPC1L-217ENST00000537323 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
PABPC1L-217ENST00000537323 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
PABPC1L-217ENST00000537323 KRTAP10-9P60411 292 aa13.21□□□□□ -0.29
PABPC1L-217ENST00000537323 ZNF876PQ49A33 203 aa13.21□□□□□ -0.29
PABPC1L-217ENST00000537323 IGLL5B9A064 214 aa13.21□□□□□ -0.3
PABPC1L-217ENST00000537323 CFAP161Q6P656 301 aa13.21□□□□□ -0.3
PABPC1L-217ENST00000537323 ZNF843Q8N446 348 aa13.21□□□□□ -0.3
PABPC1L-217ENST00000537323 PEMTQ9UBM1 199 aa13.21□□□□□ -0.3
PABPC1L-217ENST00000537323 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
PABPC1L-217ENST00000537323 DEFB131AP59861 70 aa13.2□□□□□ -0.3
PABPC1L-217ENST00000537323 KNCNA6PVL3 124 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 CD300EQ496F6 205 aaPredicted RBP13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 USP9YO00507 2555 aaPredicted RBP13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 UTP20O75691 2785 aaKnown RBP13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 DEFB104AQ8WTQ1 72 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 C4orf3Q8WVX3 66 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
PABPC1L-217ENST00000537323 CRYBG3Q68DQ2 2970 aa13.18□□□□□ -0.3
PABPC1L-217ENST00000537323 H3BMM0 161 aa13.18□□□□□ -0.3
PABPC1L-217ENST00000537323 I3L3M4 83 aa13.18□□□□□ -0.3
PABPC1L-217ENST00000537323 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
PABPC1L-217ENST00000537323 ZNF479Q96JC4 524 aa13.18□□□□□ -0.3
PABPC1L-217ENST00000537323 RBMY1A1P0DJD3 496 aaKnown RBP13.17□□□□□ -0.3
PABPC1L-217ENST00000537323 RBMY1CP0DJD4 496 aa13.17□□□□□ -0.3
PABPC1L-217ENST00000537323 RBMY1FQ15415 496 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms