RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DEFB131AP59861 70 aa10.07□□□□□ -0.8
SMG6-203ENST00000536871 KRTAP1-1Q07627 177 aa10.07□□□□□ -0.8
SMG6-203ENST00000536871 SPINK13Q1W4C9 94 aa10.07□□□□□ -0.8
SMG6-203ENST00000536871 DEFB114Q30KQ6 69 aa10.07□□□□□ -0.8
SMG6-203ENST00000536871 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
SMG6-203ENST00000536871 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
SMG6-203ENST00000536871 H3BMM0 161 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
SMG6-203ENST00000536871 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 TMEM61Q8N0U2 210 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 PTH2Q96A98 100 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 ZMAT4Q9H898 229 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 ODF1Q14990 250 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 Q8N1Y9 231 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
SMG6-203ENST00000536871 J3QR89 54 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 VCYO14598 125 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 DPM2O94777 84 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 LINC00315P59091 139 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 RAX2Q96IS3 184 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 SIGMAR1Q99720 223 aa10.05□□□□□ -0.8
SMG6-203ENST00000536871 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 IGKCP01834 107 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 PLNP26678 52 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 FXYD7P58549 80 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
SMG6-203ENST00000536871 CCL24O00175 119 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 NDUFA7O95182 113 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 HSD52Q0P140 79 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 MCRIP2Q9BUT9 160 aaKnown RBP10.04□□□□□ -0.8
SMG6-203ENST00000536871 MAP6D1Q9H9H5 199 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 CSMD1Q96PZ7 3565 aa10.04□□□□□ -0.8
SMG6-203ENST00000536871 A0A087WX48 190 aa10.03□□□□□ -0.8
SMG6-203ENST00000536871 H7C1H1 209 aa10.03□□□□□ -0.8
SMG6-203ENST00000536871 HILS1P60008 231 aa10.03□□□□□ -0.8
SMG6-203ENST00000536871 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
SMG6-203ENST00000536871 F5H697 171 aa10.02□□□□□ -0.8
SMG6-203ENST00000536871 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.8
SMG6-203ENST00000536871 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.8
SMG6-203ENST00000536871 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.8
SMG6-203ENST00000536871 BOD1L2Q8IYS8 172 aa10.02□□□□□ -0.8
SMG6-203ENST00000536871 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.8
SMG6-203ENST00000536871 SCGB3A1Q96QR1 104 aa10.02□□□□□ -0.8
SMG6-203ENST00000536871 SVEP1Q4LDE5 3571 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 POLQO75417 2590 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 A6NJY4 79 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 KNCNA6PVL3 124 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 CD300EQ496F6 205 aaPredicted RBP10.02□□□□□ -0.81
SMG6-203ENST00000536871 HIST2H2BCQ6DN03 193 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 ERASQ7Z444 233 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
SMG6-203ENST00000536871 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 INSP01308 110 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 SPXQ9BT56 116 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
SMG6-203ENST00000536871 A0A1W2PPM0 123 aa10□□□□□ -0.81
SMG6-203ENST00000536871 A8MWV9 139 aa10□□□□□ -0.81
SMG6-203ENST00000536871 F8VRH5 84 aa10□□□□□ -0.81
SMG6-203ENST00000536871 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
SMG6-203ENST00000536871 SPATA25Q9BR10 227 aa10□□□□□ -0.81
SMG6-203ENST00000536871 CRYGDP07320 174 aa10□□□□□ -0.81
SMG6-203ENST00000536871 CD28P10747 220 aa10□□□□□ -0.81
SMG6-203ENST00000536871 RHOHQ15669 191 aa10□□□□□ -0.81
SMG6-203ENST00000536871 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
SMG6-203ENST00000536871 TMEM141Q96I45 108 aa10□□□□□ -0.81
SMG6-203ENST00000536871 DUX3Q96PT4 197 aa10□□□□□ -0.81
SMG6-203ENST00000536871 M0R2P5 195 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 SPRY2O43597 315 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 FGF6P10767 208 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 FABP2P12104 132 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 ZNF56Q15929 161 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 HHLA3Q9XRX5 114 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 SPCS1Q9Y6A9 102 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 CRYBG3Q68DQ2 2970 aa9.99□□□□□ -0.81
SMG6-203ENST00000536871 A0A087WWL8 130 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 SDHAF1A6NFY7 115 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 OR11H12B2RN74 326 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 M0QY20 66 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 RHODO00212 210 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 AZU1P20160 251 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 CITED2Q99967 270 aaPredicted RBP9.98□□□□□ -0.81
SMG6-203ENST00000536871 CELSR2Q9HCU4 2923 aa9.98□□□□□ -0.81
SMG6-203ENST00000536871 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms