RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MGPP08493 103 aa12.27□□□□□ -0.45
NXF1-216ENST00000533499 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.45
NXF1-216ENST00000533499 NUP35Q8NFH5 326 aa12.27□□□□□ -0.45
NXF1-216ENST00000533499 TRGC1P0CF51 173 aa12.26□□□□□ -0.45
NXF1-216ENST00000533499 ZNF56Q15929 161 aa12.26□□□□□ -0.45
NXF1-216ENST00000533499 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
NXF1-216ENST00000533499 SMIM15Q7Z3B0 74 aa12.26□□□□□ -0.45
NXF1-216ENST00000533499 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
NXF1-216ENST00000533499 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 SMIM27A0A1W2PRY6 76 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 RHODO00212 210 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 SLAQ13239 276 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 CLRN3Q8NCR9 226 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 RPS10P5Q9NQ39 176 aa12.25□□□□□ -0.45
NXF1-216ENST00000533499 C7orf77A4D0Y5 90 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 CRYGDP07320 174 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 EVI2AP22794 236 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 CRYBA4P53673 196 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 RIGQ13278 110 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 WDR73Q6P4I2 378 aa12.24□□□□□ -0.45
NXF1-216ENST00000533499 CIDEAO60543 219 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
NXF1-216ENST00000533499 FOXA3P55318 350 aaPredicted RBP12.23□□□□□ -0.45
NXF1-216ENST00000533499 FAM3BP58499 235 aaPredicted RBP12.23□□□□□ -0.45
NXF1-216ENST00000533499 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
NXF1-216ENST00000533499 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 Q6ZSN1 163 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 SVBPQ8N300 66 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 CTDSP1Q9GZU7 261 aa12.23□□□□□ -0.45
NXF1-216ENST00000533499 SNAPINO95295 136 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 GYPEP15421 78 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 CAMPP49913 170 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
NXF1-216ENST00000533499 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
NXF1-216ENST00000533499 RHEBQ15382 184 aa12.21□□□□□ -0.45
NXF1-216ENST00000533499 CNFNQ9BYD5 112 aa12.21□□□□□ -0.45
NXF1-216ENST00000533499 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
NXF1-216ENST00000533499 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
NXF1-216ENST00000533499 A0A096LPF7 62 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 K7EQD1 137 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 RHOHQ15669 191 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 UFSP1Q6NVU6 142 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
NXF1-216ENST00000533499 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
NXF1-216ENST00000533499 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 P0DMU3 169 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 S100PP25815 95 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 SRIP30626 198 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 TCTAP57738 103 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 RAB4BP61018 213 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 GAGE1Q13065 139 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 GAGE4Q13068 117 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 GAGE5Q13069 117 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 GAGE13Q4V321 117 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
NXF1-216ENST00000533499 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
NXF1-216ENST00000533499 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
NXF1-216ENST00000533499 CSMD3Q7Z407 3707 aa12.16□□□□□ -0.46
NXF1-216ENST00000533499 H3BNG1 76 aa12.16□□□□□ -0.46
NXF1-216ENST00000533499 S100A8P05109 93 aa12.16□□□□□ -0.46
NXF1-216ENST00000533499 HBBP68871 147 aa12.16□□□□□ -0.46
NXF1-216ENST00000533499 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
NXF1-216ENST00000533499 A0A087WWC5 75 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 A0A1B0GW15 77 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 LINC00315P59091 139 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
NXF1-216ENST00000533499 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
NXF1-216ENST00000533499 H7C1H1 209 aa12.14□□□□□ -0.47
NXF1-216ENST00000533499 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
NXF1-216ENST00000533499 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
NXF1-216ENST00000533499 Q9UF83 564 aa12.14□□□□□ -0.47
NXF1-216ENST00000533499 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
NXF1-216ENST00000533499 LY6G6CO95867 125 aa12.13□□□□□ -0.47
NXF1-216ENST00000533499 RPL36AP83881 106 aaKnown RBP12.13□□□□□ -0.47
NXF1-216ENST00000533499 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
NXF1-216ENST00000533499 NEGR1Q7Z3B1 354 aa12.13□□□□□ -0.47
NXF1-216ENST00000533499 ATP5L2Q7Z4Y8 100 aa12.13□□□□□ -0.47
NXF1-216ENST00000533499 RPL36ALQ969Q0 106 aaKnown RBP12.13□□□□□ -0.47
NXF1-216ENST00000533499 TMEM242Q9NWH2 141 aa12.13□□□□□ -0.47
NXF1-216ENST00000533499 CCL18P55774 89 aa12.12□□□□□ -0.47
NXF1-216ENST00000533499 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
NXF1-216ENST00000533499 PLECQ15149 4684 aaKnown RBP12.11□□□□□ -0.47
NXF1-216ENST00000533499 TRBV10-1A0A0K0K1A3 114 aa12.11□□□□□ -0.47
NXF1-216ENST00000533499 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
NXF1-216ENST00000533499 M0QY20 66 aa12.11□□□□□ -0.47
NXF1-216ENST00000533499 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
NXF1-216ENST00000533499 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms