RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 Q6ZVH6 145 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 C2orf70A6NJV1 201 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 ANKRD39Q53RE8 183 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 LINC01545Q5VT33 79 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 K7EP13 123 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
PHRF1-205ENST00000533464 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
PHRF1-205ENST00000533464 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
PHRF1-205ENST00000533464 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
PHRF1-205ENST00000533464 AMTNQ6UX39 209 aa13.5□□□□□ -0.25
PHRF1-205ENST00000533464 Q8N1Y9 231 aa13.5□□□□□ -0.25
PHRF1-205ENST00000533464 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
PHRF1-205ENST00000533464 LINC01548A6NM66 108 aa13.5□□□□□ -0.25
PHRF1-205ENST00000533464 GAGE2AQ6NT46 116 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 DNAJC30Q96LL9 226 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 H3BMG7 143 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 C12orf74Q32Q52 190 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 C19orf84I3L1E1 186 aa13.49□□□□□ -0.25
PHRF1-205ENST00000533464 CTRLP40313 264 aa13.48□□□□□ -0.25
PHRF1-205ENST00000533464 ZFP2Q6ZN57 461 aa13.48□□□□□ -0.25
PHRF1-205ENST00000533464 A0A0J9YY99 117 aa13.48□□□□□ -0.25
PHRF1-205ENST00000533464 CEP295Q9C0D2 2601 aa13.47□□□□□ -0.25
PHRF1-205ENST00000533464 TRBV6-1A0A0K0K1D8 114 aa13.47□□□□□ -0.25
PHRF1-205ENST00000533464 A6NDX4 124 aa13.47□□□□□ -0.25
PHRF1-205ENST00000533464 F8W1H4 67 aa13.47□□□□□ -0.25
PHRF1-205ENST00000533464 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
PHRF1-205ENST00000533464 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.25
PHRF1-205ENST00000533464 RNF152Q8N8N0 203 aa13.46□□□□□ -0.25
PHRF1-205ENST00000533464 H3BMM0 161 aa13.46□□□□□ -0.25
PHRF1-205ENST00000533464 IGLV2-8P01709 118 aa13.46□□□□□ -0.25
PHRF1-205ENST00000533464 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
PHRF1-205ENST00000533464 A0A0J9YXV3 536 aa13.45□□□□□ -0.26
PHRF1-205ENST00000533464 DEFB125Q8N687 156 aa13.45□□□□□ -0.26
PHRF1-205ENST00000533464 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
PHRF1-205ENST00000533464 XCL1P47992 114 aa13.45□□□□□ -0.26
PHRF1-205ENST00000533464 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
PHRF1-205ENST00000533464 DSCAMO60469 2012 aa13.44□□□□□ -0.26
PHRF1-205ENST00000533464 Q9H8V8 135 aa13.44□□□□□ -0.26
PHRF1-205ENST00000533464 RPL39P62891 51 aaKnown RBP13.44□□□□□ -0.26
PHRF1-205ENST00000533464 TTTY13Q9BZ97 58 aa13.44□□□□□ -0.26
PHRF1-205ENST00000533464 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
PHRF1-205ENST00000533464 NUP210LQ5VU65 1888 aa13.43□□□□□ -0.26
PHRF1-205ENST00000533464 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
PHRF1-205ENST00000533464 TNFRSF13BO14836 293 aaPredicted RBP13.42□□□□□ -0.26
PHRF1-205ENST00000533464 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 PRORYQ9H606 182 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 CCL25O15444 150 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 FSTL3O95633 263 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 INAFM2P0DMQ5 153 aa13.42□□□□□ -0.26
PHRF1-205ENST00000533464 CEP192Q8TEP8 1941 aa13.41□□□□□ -0.26
PHRF1-205ENST00000533464 C5orf38Q86SI9 138 aa13.41□□□□□ -0.26
PHRF1-205ENST00000533464 CRYGBP07316 175 aa13.41□□□□□ -0.26
PHRF1-205ENST00000533464 Q6ZQT7 251 aa13.41□□□□□ -0.26
PHRF1-205ENST00000533464 A0A1B0GXF2 115 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 CFC1BP0CG36 223 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 CFC1P0CG37 223 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 C16orf74Q96GX8 76 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 PIFOQ8TCI5 191 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 MLST8Q9BVC4 326 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 MDFICQ9P1T7 246 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 A0A0J9YX75 114 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 F8WEM9 126 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 MED14OSP0DP75 135 aa13.4□□□□□ -0.26
PHRF1-205ENST00000533464 SOCS3O14543 225 aa13.39□□□□□ -0.27
PHRF1-205ENST00000533464 C9orf66Q5T8R8 295 aa13.39□□□□□ -0.27
PHRF1-205ENST00000533464 K7EQD1 137 aa13.39□□□□□ -0.27
PHRF1-205ENST00000533464 LY6LH3BQJ8 138 aa13.38□□□□□ -0.27
PHRF1-205ENST00000533464 GYPEP15421 78 aa13.38□□□□□ -0.27
PHRF1-205ENST00000533464 SLC25A29Q8N8R3 303 aa13.38□□□□□ -0.27
PHRF1-205ENST00000533464 CARD19Q96LW7 228 aa13.38□□□□□ -0.27
PHRF1-205ENST00000533464 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
PHRF1-205ENST00000533464 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
PHRF1-205ENST00000533464 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
PHRF1-205ENST00000533464 LOXL1Q08397 574 aaPredicted RBP13.37□□□□□ -0.27
PHRF1-205ENST00000533464 CITED2Q99967 270 aaPredicted RBP13.37□□□□□ -0.27
PHRF1-205ENST00000533464 IGHG4P01861 327 aa13.37□□□□□ -0.27
PHRF1-205ENST00000533464 IGF1P05019 195 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 BOD1L2Q8IYS8 172 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 ATP6V0E2Q8NHE4 81 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 BAALCQ8WXS3 180 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 DAZ2Q13117 558 aaKnown RBP13.36□□□□□ -0.27
PHRF1-205ENST00000533464 DAZ4Q86SG3 579 aaKnown RBP13.36□□□□□ -0.27
PHRF1-205ENST00000533464 DAZ3Q9NR90 486 aaKnown RBP13.36□□□□□ -0.27
PHRF1-205ENST00000533464 TOMM6Q96B49 74 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 TRAV12-1A0A0B4J245 112 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 EBI3Q14213 229 aa13.36□□□□□ -0.27
PHRF1-205ENST00000533464 ESM1Q9NQ30 184 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 ODF1Q14990 250 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 DSCAML1Q8TD84 2053 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 FXYD2P54710 66 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 C11orf71Q6IPW1 123 aa13.35□□□□□ -0.27
PHRF1-205ENST00000533464 IGLL5B9A064 214 aa13.34□□□□□ -0.27
PHRF1-205ENST00000533464 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms