RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 ZMAT4Q9H898 229 aa10.53□□□□□ -0.72
NXF1-214ENST00000533048 JPT2Q9H910 190 aa10.53□□□□□ -0.72
NXF1-214ENST00000533048 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 RHODO00212 210 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 PHOX2AO14813 284 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 DEFB4AO15263 64 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 CIDEAO60543 219 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 SPART-AS1P0CW21 52 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.73
NXF1-214ENST00000533048 RAB4BP61018 213 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 SLAQ13239 276 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 ZFP2Q6ZN57 461 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 C14orf178Q8N769 122 aaPredicted RBP10.52□□□□□ -0.73
NXF1-214ENST00000533048 FRZBQ92765 325 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 SAMD10Q9BYL1 202 aa10.52□□□□□ -0.73
NXF1-214ENST00000533048 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 GAGE7O76087 117 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
NXF1-214ENST00000533048 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 RAB4AP20338 218 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 AMN1Q8IY45 258 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
NXF1-214ENST00000533048 CELA1Q9UNI1 258 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 TRAPPC1Q9Y5R8 145 aa10.51□□□□□ -0.73
NXF1-214ENST00000533048 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
NXF1-214ENST00000533048 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
NXF1-214ENST00000533048 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
NXF1-214ENST00000533048 A0A087WWL8 130 aa10.5□□□□□ -0.73
NXF1-214ENST00000533048 APCSP02743 223 aa10.5□□□□□ -0.73
NXF1-214ENST00000533048 SMIM17P0DL12 118 aa10.5□□□□□ -0.73
NXF1-214ENST00000533048 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
NXF1-214ENST00000533048 EDA2RQ9HAV5 297 aa10.5□□□□□ -0.73
NXF1-214ENST00000533048 TRGV2A0A075B6R0 118 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 TRGC2P03986 189 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 MRPL51Q4U2R6 128 aaKnown RBP10.49□□□□□ -0.73
NXF1-214ENST00000533048 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 U3KQK5 164 aa10.49□□□□□ -0.73
NXF1-214ENST00000533048 PPBPP02775 128 aa10.48□□□□□ -0.73
NXF1-214ENST00000533048 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
NXF1-214ENST00000533048 FAM74A4Q5TZK3 123 aa10.48□□□□□ -0.73
NXF1-214ENST00000533048 DEFB130BP0DP73 79 aa10.47□□□□□ -0.73
NXF1-214ENST00000533048 DEFB130AP0DP74 79 aa10.47□□□□□ -0.73
NXF1-214ENST00000533048 DAD1P61803 113 aa10.47□□□□□ -0.73
NXF1-214ENST00000533048 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
NXF1-214ENST00000533048 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
NXF1-214ENST00000533048 MGPP08493 103 aa10.46□□□□□ -0.73
NXF1-214ENST00000533048 ZNF56Q15929 161 aa10.46□□□□□ -0.73
NXF1-214ENST00000533048 SUMO4Q6EEV6 95 aa10.46□□□□□ -0.73
NXF1-214ENST00000533048 ORMDL3Q8N138 153 aa10.46□□□□□ -0.73
NXF1-214ENST00000533048 D6R8Y8 96 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 M0QY20 66 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 GATA1P15976 413 aaPredicted RBP10.45□□□□□ -0.74
NXF1-214ENST00000533048 C12orf74Q32Q52 190 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
NXF1-214ENST00000533048 LAMTOR2Q9Y2Q5 125 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
NXF1-214ENST00000533048 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 ATP5G1P05496 136 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 CKS2P33552 79 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 FHL2Q14192 279 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 KIAA1644Q3SXP7 199 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 Q6ZSN1 163 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 NRACQ8N912 160 aa10.44□□□□□ -0.74
NXF1-214ENST00000533048 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 F5H697 171 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 H7C1H1 209 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 PPP1R17O96001 155 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
NXF1-214ENST00000533048 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 C1orf196B1AJZ1 125 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 SMKR1H3BMG3 65 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 NCR2O95944 276 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 HOXA5P20719 270 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 SRIP30626 198 aa10.42□□□□□ -0.74
NXF1-214ENST00000533048 TRGV4A0A0C4DH28 118 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 NPYP01303 97 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
NXF1-214ENST00000533048 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
NXF1-214ENST00000533048 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
NXF1-214ENST00000533048 K7EQD1 137 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms