RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 TSSC4Q9Y5U2 329 aaPredicted RBP11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 A0A1W2PPM0 123 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 K7EP34 96 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 SORL1Q92673 2214 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 C9JAW5 83 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 GHRHP01286 108 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 S100A7L2Q5SY68 101 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 C2orf70A6NJV1 201 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 U3KQE9 123 aa11.74□□□□□ -0.53
PCDHA3-202ENST00000532566 PCNTO95613 3336 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 Q6ZVH6 145 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 GATD1Q8NB37 220 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
PCDHA3-202ENST00000532566 K7ERJ3 54 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 VWC2LB2RUY7 222 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 K7EP13 123 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 MYCNOSP40205 109 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 JPT2Q9H910 190 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 ETDBQ3ZM63 59 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 Q8N1Y9 231 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
PCDHA3-202ENST00000532566 IGF1P05019 195 aa11.71□□□□□ -0.53
PCDHA3-202ENST00000532566 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
PCDHA3-202ENST00000532566 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
PCDHA3-202ENST00000532566 DAD1P61803 113 aa11.71□□□□□ -0.54
PCDHA3-202ENST00000532566 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
PCDHA3-202ENST00000532566 GAGE6Q13070 117 aa11.7□□□□□ -0.54
PCDHA3-202ENST00000532566 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
PCDHA3-202ENST00000532566 HERVK_113P63121 156 aa11.7□□□□□ -0.54
PCDHA3-202ENST00000532566 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
PCDHA3-202ENST00000532566 GTSF1LQ9H1H1 148 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 IGLC6P0CF74 106 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 NOP10Q9NPE3 64 aaKnown RBP11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 SPTBN4Q9H254 2564 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 F5H768 121 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 F8W1H4 67 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
PCDHA3-202ENST00000532566 IGHG4P01861 327 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 FGF6P10767 208 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 A0A0J9YX75 114 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
PCDHA3-202ENST00000532566 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 IGKV2-29A2NJV5 120 aaPredicted RBP11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 SPINK8P0C7L1 97 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 OVOL2Q9BRP0 275 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 H3BMG7 143 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 APOC4P55056 127 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 TTTY13Q9BZ97 58 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
PCDHA3-202ENST00000532566 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
PCDHA3-202ENST00000532566 ODF1Q14990 250 aa11.66□□□□□ -0.54
PCDHA3-202ENST00000532566 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
PCDHA3-202ENST00000532566 Q8N6K4 173 aa11.66□□□□□ -0.54
PCDHA3-202ENST00000532566 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
PCDHA3-202ENST00000532566 PFN2P35080 140 aa11.65□□□□□ -0.54
PCDHA3-202ENST00000532566 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
PCDHA3-202ENST00000532566 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
PCDHA3-202ENST00000532566 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
PCDHA3-202ENST00000532566 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
PCDHA3-202ENST00000532566 CRIP1P50238 77 aa11.65□□□□□ -0.55
PCDHA3-202ENST00000532566 TOMM6Q96B49 74 aa11.65□□□□□ -0.55
PCDHA3-202ENST00000532566 ANAPC13Q9BS18 74 aa11.64□□□□□ -0.55
PCDHA3-202ENST00000532566 COL4A2P08572 1712 aa11.64□□□□□ -0.55
PCDHA3-202ENST00000532566 HIGD1BQ9P298 99 aa11.64□□□□□ -0.55
PCDHA3-202ENST00000532566 TIMM17AQ99595 171 aa11.64□□□□□ -0.55
PCDHA3-202ENST00000532566 CDSNQ15517 529 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 PPDPFLQ8WWR9 84 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 MDFICQ9P1T7 246 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 CCL25O15444 150 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 BAALCQ8WXS3 180 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 SMAD5-AS1Q9Y6J3 95 aa11.63□□□□□ -0.55
PCDHA3-202ENST00000532566 TRAV25A0A0B4J276 109 aa11.62□□□□□ -0.55
PCDHA3-202ENST00000532566 FXYD2P54710 66 aa11.61□□□□□ -0.55
PCDHA3-202ENST00000532566 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
PCDHA3-202ENST00000532566 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
PCDHA3-202ENST00000532566 E9PLD3 99 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms