RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 LINC01559Q495D7 138 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
AMBRA1-210ENST00000531542 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 JPT2Q9H910 190 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 Q9UF83 564 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 MYCBP2O75592 4640 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 MAP1LC3B2A6NCE7 125 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 DAZ4Q86SG3 579 aaKnown RBP8.81□□□□□ -1
AMBRA1-210ENST00000531542 NIT1Q86X76 327 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 Q8N3U1 123 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 STOML3Q8TAV4 291 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 RMI2Q96E14 147 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 MAP1LC3BQ9GZQ8 125 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 DAZ3Q9NR90 486 aaKnown RBP8.81□□□□□ -1
AMBRA1-210ENST00000531542 CYTL1Q9NRR1 136 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 FAM30AQ9NZY2 134 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 PHLDA3Q9Y5J5 127 aa8.81□□□□□ -1
AMBRA1-210ENST00000531542 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
AMBRA1-210ENST00000531542 UBE2G1P62253 170 aa8.8□□□□□ -1
AMBRA1-210ENST00000531542 WFDC2Q14508 124 aa8.8□□□□□ -1
AMBRA1-210ENST00000531542 ZFP82Q8N141 532 aa8.8□□□□□ -1
AMBRA1-210ENST00000531542 M0R036 132 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 S100A9P06702 114 aaKnown RBP8.79□□□□□ -1
AMBRA1-210ENST00000531542 CXCL1P09341 107 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 TPT1P13693 172 aaKnown RBP8.79□□□□□ -1
AMBRA1-210ENST00000531542 ELOBQ15370 118 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 ATRAIDQ6UW56 229 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 Q8N976 141 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 OR10G8Q8NGN5 311 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
AMBRA1-210ENST00000531542 GRIFINA4D1Z8 144 aa8.78□□□□□ -1
AMBRA1-210ENST00000531542 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
AMBRA1-210ENST00000531542 DNAH8Q96JB1 4490 aa8.78□□□□□ -1
AMBRA1-210ENST00000531542 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 UMAD1C9J7I0 102 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 ARPC5O15511 151 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 UBE2D3P61077 147 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 UBE2D2P62837 147 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 HAMPP81172 84 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 RPL36AP83881 106 aaKnown RBP8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 ZNF345Q14585 488 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 CST9LP1Q5W188 147 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 MBD3L1Q8WWY6 194 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 RPL36ALQ969Q0 106 aaKnown RBP8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
AMBRA1-210ENST00000531542 A0A087WWL8 130 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 A0A087WX48 190 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 M0R381 172 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 RAB4BP61018 213 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 Q0VG73 95 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 SSBP4Q9BWG4 385 aaPredicted RBP8.76□□□□□ -1.01
AMBRA1-210ENST00000531542 PAGE4O60829 102 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 AKR1C3P42330 323 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 RGS21Q2M5E4 152 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 KCNRGQ8N5I3 272 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 BAALCQ8WXS3 180 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 KLK12Q9UKR0 248 aa8.75□□□□□ -1.01
AMBRA1-210ENST00000531542 TRBV6-8A0A0A6YYG3 113 aa8.74□□□□□ -1.01
AMBRA1-210ENST00000531542 LECT2O14960 151 aa8.74□□□□□ -1.01
AMBRA1-210ENST00000531542 SNAI2O43623 268 aa8.74□□□□□ -1.01
AMBRA1-210ENST00000531542 KCNIP4Q6PIL6 250 aa8.74□□□□□ -1.01
AMBRA1-210ENST00000531542 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 TMSB15BA0A087X1C1 80 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 HMSDA8MTL9 139 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 OR5AL1P0C617 328 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 PKIAP61925 76 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
AMBRA1-210ENST00000531542 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 A0A0D9SG52 128 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 RBFOX3A6NFN3 312 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 TMEM97Q5BJF2 176 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 BAGE2Q86Y30 109 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 ZNF471Q9BX82 626 aaPredicted RBP8.72□□□□□ -1.01
AMBRA1-210ENST00000531542 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
AMBRA1-210ENST00000531542 PFDN1O60925 122 aa8.71□□□□□ -1.02
AMBRA1-210ENST00000531542 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.71□□□□□ -1.02
AMBRA1-210ENST00000531542 OR10AG1Q8NH19 301 aa8.71□□□□□ -1.02
AMBRA1-210ENST00000531542 VAX2Q9UIW0 290 aa8.71□□□□□ -1.02
AMBRA1-210ENST00000531542 SCO2A0A1W2PP80 73 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 EIF5AP63241 154 aaKnown RBP8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 TMUB2Q71RG4 321 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 FAM213BQ8TBF2 198 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
AMBRA1-210ENST00000531542 TMEM262E9PQX1 116 aa8.69□□□□□ -1.02
AMBRA1-210ENST00000531542 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
AMBRA1-210ENST00000531542 RPL19P84098 196 aaKnown RBP8.69□□□□□ -1.02
AMBRA1-210ENST00000531542 ZNF56Q15929 161 aa8.69□□□□□ -1.02
AMBRA1-210ENST00000531542 SPANXN1Q5VSR9 72 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms