RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PIRTP0C851 137 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 FXYD6P3P58550 94 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 SPCS2Q15005 226 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 IFI27L1Q96BM0 104 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 CCDC167Q9P0B6 97 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 F5P12259 2224 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 PHIPQ8WWQ0 1821 aa0.82□□□□□ -2.28
BRCA2-203ENST00000528762 NRXN2Q9P2S2 1712 aa0.81□□□□□ -2.28
BRCA2-203ENST00000528762 TEX49A0A1B0GTD5 131 aa0.81□□□□□ -2.28
BRCA2-203ENST00000528762 DLEU1O43261 78 aa0.81□□□□□ -2.28
BRCA2-203ENST00000528762 NPC2P61916 151 aa0.81□□□□□ -2.28
BRCA2-203ENST00000528762 TSKUQ8WUA8 353 aa0.81□□□□□ -2.28
BRCA2-203ENST00000528762 PSMG3Q9BT73 122 aaPredicted RBP0.81□□□□□ -2.28
BRCA2-203ENST00000528762 TCRBV3S1A0A5B6 114 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 BTG2P78543 158 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 KCNRGQ8N5I3 272 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 PLAC4Q8WY50 150 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 SNRNP25Q9BV90 132 aaKnown RBP0.8□□□□□ -2.28
BRCA2-203ENST00000528762 NALCNQ8IZF0 1738 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 NWD2Q9ULI1 1742 aa0.8□□□□□ -2.28
BRCA2-203ENST00000528762 RBBP6Q7Z6E9 1792 aaKnown RBP0.8□□□□□ -2.28
BRCA2-203ENST00000528762 DOCK11Q5JSL3 2073 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 LINC00587B1AMM8 73 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 KLKP1Q107X0 134 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 ZNF56Q15929 161 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 SPINK13Q1W4C9 94 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 C9orf116Q5BN46 136 aaPredicted RBP0.79□□□□□ -2.28
BRCA2-203ENST00000528762 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 SPANXN1Q5VSR9 72 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 LSM10Q969L4 123 aaKnown RBP0.79□□□□□ -2.28
BRCA2-203ENST00000528762 TMEM141Q96I45 108 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 AGPAT4-IT1Q9H0P7 198 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 TMEM242Q9NWH2 141 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 ARFGEF1Q9Y6D6 1849 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 ROCK2O75116 1388 aaKnown RBP0.79□□□□□ -2.28
BRCA2-203ENST00000528762 PEG3Q9GZU2 1588 aa0.79□□□□□ -2.28
BRCA2-203ENST00000528762 FBN2P35556 2912 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 NAV3Q8IVL0 2385 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 TNS1Q9HBL0 1735 aaKnown RBP0.78□□□□□ -2.28
BRCA2-203ENST00000528762 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.28
BRCA2-203ENST00000528762 MYH8P13535 1937 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 LY6G6CO95867 125 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 APODP05090 189 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 HIST1H1DP16402 221 aaKnown RBP0.78□□□□□ -2.28
BRCA2-203ENST00000528762 ZNF137PP52743 207 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 MEIG1Q5JSS6 88 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 C6orf52Q5T4I8 152 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 SLC48A1Q6P1K1 146 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.78□□□□□ -2.28
BRCA2-203ENST00000528762 PPP1R1CQ8WVI7 109 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 C2orf88Q9BSF0 95 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 SEC11CQ9BY50 192 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 TMEM14BQ9NUH8 114 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 DAPK1P53355 1430 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 JMJD1CQ15652 2540 aa0.78□□□□□ -2.28
BRCA2-203ENST00000528762 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.29
BRCA2-203ENST00000528762 A0A087WTM6 91 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 A0A096LNT2 108 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 SPAARA0A1B0GVQ0 90 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 IL5P05113 134 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 ELOF1P60002 83 aaKnown RBP0.77□□□□□ -2.29
BRCA2-203ENST00000528762 UBE2G1P62253 170 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 DSCR8Q96T75 97 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 RERGLQ9H628 205 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 COA4Q9NYJ1 87 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 QRICH2Q9H0J4 1663 aa0.77□□□□□ -2.29
BRCA2-203ENST00000528762 SIPA1L3O60292 1781 aaPredicted RBP0.76□□□□□ -2.29
BRCA2-203ENST00000528762 CFTRP13569 1480 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 TRAV12-3A0A0B4J271 114 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 FAM92AA1XBS5 289 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 CLPSL1A2RUU4 121 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 NDUFB6O95139 128 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 FGF7P21781 194 aa0.76□□□□□ -2.29
BRCA2-203ENST00000528762 RPL37P61927 97 aaKnown RBP0.76□□□□□ -2.29
BRCA2-203ENST00000528762 MYO7AQ13402 2215 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 FAM25AB3EWG3 89 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 FAM25CB3EWG5 89 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 FAM25GB3EWG6 89 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 PIPP12273 146 aaPredicted RBP0.75□□□□□ -2.29
BRCA2-203ENST00000528762 CCL3L1P16619 93 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 RPL7L1Q6DKI1 246 aaKnown RBP0.75□□□□□ -2.29
BRCA2-203ENST00000528762 C10orf82Q8WW14 230 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 SPTSSAQ969W0 71 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 PDCD10Q9BUL8 212 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 BET1LQ9NYM9 111 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 SERP1Q9Y6X1 66 aa0.75□□□□□ -2.29
BRCA2-203ENST00000528762 ZNF518AQ6AHZ1 1483 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 DOCK1Q14185 1865 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 PATJQ8NI35 1801 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 Q6AWC8 147 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 Q8N8P6 123 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 PP6455Q8WZ26 134 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 SCN3BQ9NY72 215 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
BRCA2-203ENST00000528762 PI4KAP42356 2102 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 CUL7Q14999 1698 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 A0A0D9SG42 100 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 RBAKDNA6NC62 111 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 CBLN1P23435 193 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms