RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SRRM2Q9UQ35 2752 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 A0A087WWL8 130 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 SH2D1AO60880 128 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 LINC00694P0DN24 101 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 FAM162BQ5T6X4 162 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 RMI2Q96E14 147 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 HERC1Q15751 4861 aa14.82□□□□□ -0.04
TRAPPC4-208ENST00000527680 TMSB15BA0A087X1C1 80 aa14.81□□□□□ -0.04
TRAPPC4-208ENST00000527680 M0R381 172 aa14.81□□□□□ -0.04
TRAPPC4-208ENST00000527680 TPT1P13693 172 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-208ENST00000527680 FMC1Q96HJ9 113 aa14.81□□□□□ -0.04
TRAPPC4-208ENST00000527680 SEC11BP0C7V7 166 aa14.8□□□□□ -0.04
TRAPPC4-208ENST00000527680 DNLZQ5SXM8 178 aa14.8□□□□□ -0.04
TRAPPC4-208ENST00000527680 CST9LP1Q5W188 147 aa14.8□□□□□ -0.04
TRAPPC4-208ENST00000527680 VPS13BQ7Z7G8 4022 aa14.8□□□□□ -0.04
TRAPPC4-208ENST00000527680 IGKV2D-24A0A075B6R9 120 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 MAP1LC3B2A6NCE7 125 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 KCNIP4Q6PIL6 250 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 STOML3Q8TAV4 291 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 SFRP2Q96HF1 295 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 MAP1LC3BQ9GZQ8 125 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 KLK12Q9UKR0 248 aa14.79□□□□□ -0.04
TRAPPC4-208ENST00000527680 A0A087WX48 190 aa14.78□□□□□ -0.04
TRAPPC4-208ENST00000527680 RBFOX3A6NFN3 312 aa14.78□□□□□ -0.04
TRAPPC4-208ENST00000527680 J3QL48 77 aa14.78□□□□□ -0.04
TRAPPC4-208ENST00000527680 PLA2G1BP04054 148 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-208ENST00000527680 NIT1Q86X76 327 aa14.78□□□□□ -0.04
TRAPPC4-208ENST00000527680 Q8N976 141 aa14.77□□□□□ -0.05
TRAPPC4-208ENST00000527680 RPL36AP83881 106 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 ZNF674Q2M3X9 581 aa14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 LINC01620Q4KN68 170 aa14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 COX8CQ7Z4L0 72 aa14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 ZFP82Q8N141 532 aa14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 RPL36ALQ969Q0 106 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 UBE2WQ96B02 151 aa14.76□□□□□ -0.05
TRAPPC4-208ENST00000527680 ARPC5O15511 151 aa14.75□□□□□ -0.05
TRAPPC4-208ENST00000527680 ELOBQ15370 118 aa14.75□□□□□ -0.05
TRAPPC4-208ENST00000527680 DNAJC30Q96LL9 226 aa14.75□□□□□ -0.05
TRAPPC4-208ENST00000527680 TMEM262E9PQX1 116 aa14.74□□□□□ -0.05
TRAPPC4-208ENST00000527680 AKR1C3P42330 323 aa14.74□□□□□ -0.05
TRAPPC4-208ENST00000527680 LINC01559Q495D7 138 aa14.74□□□□□ -0.05
TRAPPC4-208ENST00000527680 LINC00528Q8N1L1 170 aa14.74□□□□□ -0.05
TRAPPC4-208ENST00000527680 TRBV10-1A0A0K0K1A3 114 aa14.73□□□□□ -0.05
TRAPPC4-208ENST00000527680 LTAP01374 205 aa14.73□□□□□ -0.05
TRAPPC4-208ENST00000527680 FHITP49789 147 aa14.73□□□□□ -0.05
TRAPPC4-208ENST00000527680 Q6ZSA8 131 aa14.73□□□□□ -0.05
TRAPPC4-208ENST00000527680 TCEAL7Q9BRU2 100 aa14.73□□□□□ -0.05
TRAPPC4-208ENST00000527680 TRBV7-3A0A075B6L6 115 aa14.72□□□□□ -0.05
TRAPPC4-208ENST00000527680 TRBV6-1A0A0K0K1D8 114 aa14.72□□□□□ -0.05
TRAPPC4-208ENST00000527680 CYTL1Q9NRR1 136 aa14.72□□□□□ -0.05
TRAPPC4-208ENST00000527680 PAGE4O60829 102 aa14.71□□□□□ -0.05
TRAPPC4-208ENST00000527680 CHCHD7Q9BUK0 85 aa14.71□□□□□ -0.05
TRAPPC4-208ENST00000527680 UBE2D3P61077 147 aa14.7□□□□□ -0.06
TRAPPC4-208ENST00000527680 UBE2D2P62837 147 aa14.7□□□□□ -0.06
TRAPPC4-208ENST00000527680 MYCBP2O75592 4640 aa14.7□□□□□ -0.06
TRAPPC4-208ENST00000527680 Q0VG73 95 aa14.69□□□□□ -0.06
TRAPPC4-208ENST00000527680 ZNF56Q15929 161 aa14.69□□□□□ -0.06
TRAPPC4-208ENST00000527680 SFT2D1Q8WV19 159 aa14.69□□□□□ -0.06
TRAPPC4-208ENST00000527680 DNAH8Q96JB1 4490 aa14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 A0A1B0GV50 99 aa14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 S100A9P06702 114 aaKnown RBP14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 RAB4BP61018 213 aa14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 ZNF471Q9BX82 626 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC4-208ENST00000527680 G3V3Q6 166 aa14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 SSTP61278 116 aa14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 RPL19P84098 196 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 SCXQ7RTU7 201 aa14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 DEFB104AQ8WTQ1 72 aa14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 C1orf43Q9BWL3 253 aa14.67□□□□□ -0.06
TRAPPC4-208ENST00000527680 TRBV6-8A0A0A6YYG3 113 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 F5H697 171 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 CRPP02741 224 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 BAGE2Q86Y30 109 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 C15orf54Q8N8G6 183 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 OR10AG1Q8NH19 301 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 FAM213BQ8TBF2 198 aa14.66□□□□□ -0.06
TRAPPC4-208ENST00000527680 MUC21A0A0G2JKD1 596 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 MUC21A0A140T8X8 626 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 SMLR1H3BR10 107 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 PFDN1O60925 122 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 SPANXN1Q5VSR9 72 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 OR10G8Q8NGN5 311 aa14.65□□□□□ -0.06
TRAPPC4-208ENST00000527680 ANGP03950 147 aaKnown RBP14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 RGS21Q2M5E4 152 aa14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 C14orf177Q52M58 125 aa14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 NEXN-AS1Q8NBZ9 246 aa14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 CHCHD5Q9BSY4 110 aa14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 CHAC1Q9BUX1 264 aa14.64□□□□□ -0.07
TRAPPC4-208ENST00000527680 SCO2A0A1W2PP80 73 aa14.63□□□□□ -0.07
TRAPPC4-208ENST00000527680 PRR27Q6MZM9 219 aa14.63□□□□□ -0.07
TRAPPC4-208ENST00000527680 ATRAIDQ6UW56 229 aa14.63□□□□□ -0.07
TRAPPC4-208ENST00000527680 MBD3L1Q8WWY6 194 aa14.63□□□□□ -0.07
TRAPPC4-208ENST00000527680 UMAD1C9J7I0 102 aa14.62□□□□□ -0.07
TRAPPC4-208ENST00000527680 ENHOQ6UWT2 76 aa14.62□□□□□ -0.07
TRAPPC4-208ENST00000527680 SMIM17P0DL12 118 aa14.61□□□□□ -0.07
TRAPPC4-208ENST00000527680 MPV17L2Q567V2 206 aa14.61□□□□□ -0.07
TRAPPC4-208ENST00000527680 TMUB2Q71RG4 321 aa14.61□□□□□ -0.07
TRAPPC4-208ENST00000527680 KCNRGQ8N5I3 272 aa14.61□□□□□ -0.07
TRAPPC4-208ENST00000527680 CXCL1P09341 107 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms