RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 Q8N976 141 aa13.72□□□□□ -0.21
SMPD1-203ENST00000527275 ZMAT5Q9UDW3 170 aaKnown RBP13.72□□□□□ -0.21
SMPD1-203ENST00000527275 LEPROTL1O95214 131 aa13.72□□□□□ -0.21
SMPD1-203ENST00000527275 TNFRSF6BO95407 300 aa13.72□□□□□ -0.21
SMPD1-203ENST00000527275 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
SMPD1-203ENST00000527275 GATA1P15976 413 aaPredicted RBP13.71□□□□□ -0.21
SMPD1-203ENST00000527275 MAP1LC3AQ9H492 121 aa13.71□□□□□ -0.22
SMPD1-203ENST00000527275 CRXO43186 299 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-203ENST00000527275 BTF3P20290 206 aaKnown RBP13.7□□□□□ -0.22
SMPD1-203ENST00000527275 TEX43Q6ZNM6 134 aa13.7□□□□□ -0.22
SMPD1-203ENST00000527275 C14orf178Q8N769 122 aaPredicted RBP13.7□□□□□ -0.22
SMPD1-203ENST00000527275 IGHV3-16A0A0C4DH30 117 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 NUTF2P61970 127 aaKnown RBP13.69□□□□□ -0.22
SMPD1-203ENST00000527275 DPH3P1Q9H4G8 78 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 XCL2Q9UBD3 114 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 TRAV26-2A0A0B4J265 109 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 NXPH4O95158 308 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 LINC00173Q6ZV60 143 aa13.69□□□□□ -0.22
SMPD1-203ENST00000527275 MRAP2Q96G30 205 aa13.68□□□□□ -0.22
SMPD1-203ENST00000527275 MDFICQ9P1T7 246 aa13.68□□□□□ -0.22
SMPD1-203ENST00000527275 IGHV4-30-4P0DP06 118 aa13.68□□□□□ -0.22
SMPD1-203ENST00000527275 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
SMPD1-203ENST00000527275 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
SMPD1-203ENST00000527275 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-203ENST00000527275 NRACQ8N912 160 aa13.67□□□□□ -0.22
SMPD1-203ENST00000527275 C9orf85Q96MD7 179 aa13.67□□□□□ -0.22
SMPD1-203ENST00000527275 HSPB8Q9UJY1 196 aa13.67□□□□□ -0.22
SMPD1-203ENST00000527275 MUC4Q99102 2169 aa13.67□□□□□ -0.22
SMPD1-203ENST00000527275 PRB2P02812 416 aaPredicted RBP13.66□□□□□ -0.22
SMPD1-203ENST00000527275 RBMY1A1P0DJD3 496 aaKnown RBP13.66□□□□□ -0.22
SMPD1-203ENST00000527275 RBMY1CP0DJD4 496 aa13.66□□□□□ -0.22
SMPD1-203ENST00000527275 RBMY1FQ15415 496 aaKnown RBP13.66□□□□□ -0.22
SMPD1-203ENST00000527275 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
SMPD1-203ENST00000527275 LINC00469Q8N7U9 141 aa13.66□□□□□ -0.22
SMPD1-203ENST00000527275 A0A096LNJ9 63 aa13.65□□□□□ -0.22
SMPD1-203ENST00000527275 KPRPQ5T749 579 aaPredicted RBP13.65□□□□□ -0.22
SMPD1-203ENST00000527275 DNAH3Q8TD57 4116 aa13.65□□□□□ -0.22
SMPD1-203ENST00000527275 MAP1LC3CQ9BXW4 147 aa13.65□□□□□ -0.22
SMPD1-203ENST00000527275 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
SMPD1-203ENST00000527275 TRGV11A0A075B6L2 103 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 LINC01546A6NGU7 62 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 CBY3A6NI87 242 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 MGPP08493 103 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
SMPD1-203ENST00000527275 VAMP8Q9BV40 100 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 SMIM17P0DL12 118 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 Q8N8P6 123 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 KIF25-AS1Q9Y6Z4 181 aa13.64□□□□□ -0.23
SMPD1-203ENST00000527275 NBEAL2Q6ZNJ1 2754 aa13.63□□□□□ -0.23
SMPD1-203ENST00000527275 SPATA12Q7Z6I5 190 aa13.63□□□□□ -0.23
SMPD1-203ENST00000527275 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
SMPD1-203ENST00000527275 JPT2Q9H910 190 aa13.63□□□□□ -0.23
SMPD1-203ENST00000527275 PAM16Q9Y3D7 125 aa13.63□□□□□ -0.23
SMPD1-203ENST00000527275 INSP01308 110 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 HBDP02042 147 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 HTN1P15515 57 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 SYT8Q8NBV8 401 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 IGLV2-18A0A075B6J9 118 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 LINC00315P59091 139 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
SMPD1-203ENST00000527275 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 RASL10AQ92737 203 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 A0A1B0GV90 55 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 PET117Q6UWS5 81 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 C1orf158Q8N1D5 194 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
SMPD1-203ENST00000527275 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
SMPD1-203ENST00000527275 KIR2DL5BQ8NHK3 375 aa13.6□□□□□ -0.23
SMPD1-203ENST00000527275 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 A0A087WWL8 130 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 A8MZ25 164 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 PRM2P04554 102 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 LINC01587Q99440 93 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 C20orf202A1L168 122 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 FCER1GP30273 86 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 APOC4P55056 127 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 RPL39LQ96EH5 51 aaKnown RBP13.59□□□□□ -0.23
SMPD1-203ENST00000527275 C20orf144Q9BQM9 153 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 C20orf78Q9BR46 151 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 TMEM208Q9BTX3 173 aa13.59□□□□□ -0.23
SMPD1-203ENST00000527275 H0Y8G0 127 aa13.58□□□□□ -0.24
SMPD1-203ENST00000527275 ZNF876PQ49A33 203 aa13.58□□□□□ -0.24
SMPD1-203ENST00000527275 PPP1R17O96001 155 aa13.58□□□□□ -0.24
SMPD1-203ENST00000527275 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
SMPD1-203ENST00000527275 K7EIL1 84 aa13.57□□□□□ -0.24
SMPD1-203ENST00000527275 SMIM2Q9BVW6 85 aa13.57□□□□□ -0.24
SMPD1-203ENST00000527275 F5H697 171 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 LAGE3Q14657 143 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 LINC00467Q9BRT7 94 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 C2orf88Q9BSF0 95 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 TCAPO15273 167 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 FAM74A4Q5TZK3 123 aa13.56□□□□□ -0.24
SMPD1-203ENST00000527275 ZNF705AQ6ZN79 300 aaPredicted RBP13.56□□□□□ -0.24
SMPD1-203ENST00000527275 CRYGDP07320 174 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms