RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 Q6ZSV7 163 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 C2orf91Q6ZV80 131 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 C11orf44Q8N8P7 122 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 OR11H1Q8NG94 326 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 FOXC2Q99958 501 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 TMEM208Q9BTX3 173 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 PEMTQ9UBM1 199 aa4.94□□□□□ -1.62
SHPRH-210ENST00000523276 CSPG4Q6UVK1 2322 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 ABCA12Q86UK0 2595 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 A8MTW9 85 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 DLEU1O43261 78 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 PLA2G2AP14555 144 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 RPL32P62910 135 aaKnown RBP4.93□□□□□ -1.62
SHPRH-210ENST00000523276 GAGE1Q13065 139 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 C12orf54Q6X4T0 127 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 BOD1L2Q8IYS8 172 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 OR9G4Q8NGQ1 327 aa4.93□□□□□ -1.62
SHPRH-210ENST00000523276 KNCNA6PVL3 124 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 J3QKU1 62 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 DPM2O94777 84 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 IGKCP01834 107 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 GYPEP15421 78 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 KRTAP1-1Q07627 177 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 SUMO4Q6EEV6 95 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 KLHL30-AS1Q8NEE0 82 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 DLX4Q92988 240 aaPredicted RBP4.92□□□□□ -1.62
SHPRH-210ENST00000523276 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 DUX3Q96PT4 197 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 JPT2Q9H910 190 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 MDFICQ9P1T7 246 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 HHLA3Q9XRX5 114 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 TEX15Q9BXT5 2789 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 A0A087WX48 190 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.92□□□□□ -1.62
SHPRH-210ENST00000523276 HLA-DRB4P13762 266 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 DEFB131AP59861 70 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 TMEM61Q8N0U2 210 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 SYT8Q8NBV8 401 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 CSTL1Q9H114 145 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 ESM1Q9NQ30 184 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 HLA-DRB4X5D2U9 266 aa4.92□□□□□ -1.62
SHPRH-210ENST00000523276 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 TRAV12-1A0A0B4J245 112 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 H3BMM0 161 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 SIVA1O15304 175 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 NMUP48645 174 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 TCTAP57738 103 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 DYNLRB2Q8TF09 96 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
SHPRH-210ENST00000523276 COX11Q9Y6N1 276 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 CREBBPQ92793 2442 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 NBPF19A0A087WUL8 3843 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 AKAP9Q99996 3911 aa4.91□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1BA6NDE4 496 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1EA6NEQ0 496 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1DP0C7P1 496 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1A1P0DJD3 496 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1CP0DJD4 496 aa4.9□□□□□ -1.62
SHPRH-210ENST00000523276 PLNP26678 52 aa4.9□□□□□ -1.62
SHPRH-210ENST00000523276 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 RBMY1FQ15415 496 aaKnown RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 DEFB114Q30KQ6 69 aa4.9□□□□□ -1.62
SHPRH-210ENST00000523276 PCP2Q8IVA1 136 aa4.9□□□□□ -1.62
SHPRH-210ENST00000523276 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.62
SHPRH-210ENST00000523276 IGKV2D-26A0A0A0MRZ7 120 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 TRBV6-5A0A0K0K1A5 114 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 F5H697 171 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 CRYGDP07320 174 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 NPSP0C0P6 89 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 ZC2HC1BQ5TFG8 222 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 C2orf66Q6UXQ4 117 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 Q6ZVH6 145 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 NEGR1Q7Z3B1 354 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 NEXN-AS1Q8NBZ9 246 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 MAP6D1Q9H9H5 199 aa4.9□□□□□ -1.63
SHPRH-210ENST00000523276 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.63
SHPRH-210ENST00000523276 PDZD2O15018 2839 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 CBY3A6NI87 242 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 F8VRH5 84 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 H7C1H1 209 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 M0QY20 66 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 VCYO14598 125 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 HSD52Q0P140 79 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 ZNF124Q15973 351 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 CD300EQ496F6 205 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-210ENST00000523276 FAM74A4Q5TZK3 123 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 GTSCR1Q86UQ5 136 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 SPAG8Q99932 426 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-210ENST00000523276 YAE1D1Q9NRH1 226 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 ZNF256Q9Y2P7 627 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-210ENST00000523276 ITPR3Q14573 2671 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
SHPRH-210ENST00000523276 TRBV27A0A0K0K1C4 114 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms