RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CD300EQ496F6 205 aaPredicted RBP6.24□□□□□ -1.41
HMGB4-203ENST00000519684 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
HMGB4-203ENST00000519684 COX8AP10176 69 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 FHL3Q13643 280 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 FAM74A4Q5TZK3 123 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 SUMO4Q6EEV6 95 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-203ENST00000519684 CSTL1Q9H114 145 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 DKK2Q9UBU2 259 aa6.23□□□□□ -1.41
HMGB4-203ENST00000519684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-203ENST00000519684 HINT1P49773 126 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-203ENST00000519684 ZNF56Q15929 161 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 JMJD8Q96S16 334 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 JPT2Q9H910 190 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 DPM2O94777 84 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 IGKCP01834 107 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 HTN1P15515 57 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 LINC00315P59091 139 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 HILS1P60008 231 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 RPL32P62910 135 aaKnown RBP6.22□□□□□ -1.41
HMGB4-203ENST00000519684 SCGB3A1Q96QR1 104 aa6.22□□□□□ -1.41
HMGB4-203ENST00000519684 INSP01308 110 aa6.21□□□□□ -1.41
HMGB4-203ENST00000519684 ZNF876PQ49A33 203 aa6.21□□□□□ -1.41
HMGB4-203ENST00000519684 STPG4Q8N801 248 aa6.21□□□□□ -1.41
HMGB4-203ENST00000519684 TOMM6Q96B49 74 aa6.21□□□□□ -1.41
HMGB4-203ENST00000519684 MUC4Q99102 2169 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1BA6NDE4 496 aaKnown RBP6.21□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1EA6NEQ0 496 aaKnown RBP6.21□□□□□ -1.42
HMGB4-203ENST00000519684 VCYO14598 125 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1DP0C7P1 496 aaKnown RBP6.21□□□□□ -1.42
HMGB4-203ENST00000519684 ZNF415Q09FC8 603 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 PDZD2O15018 2839 aa6.21□□□□□ -1.42
HMGB4-203ENST00000519684 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 NDUFA7O95182 113 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 RBMY1FQ15415 496 aaKnown RBP6.2□□□□□ -1.42
HMGB4-203ENST00000519684 C2orf66Q6UXQ4 117 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 C12orf54Q6X4T0 127 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
HMGB4-203ENST00000519684 STHQ8IWL8 128 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 ZMAT4Q9H898 229 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 ZNF256Q9Y2P7 627 aaPredicted RBP6.2□□□□□ -1.42
HMGB4-203ENST00000519684 A0A087WX48 190 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 OR11H12B2RN74 326 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 PLNP26678 52 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 NMUP48645 174 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 LINC01587Q99440 93 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
HMGB4-203ENST00000519684 CHD6Q8TD26 2715 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 H7C1H1 209 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 CRYGDP07320 174 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 CMC4P56277 68 aaPredicted RBP6.19□□□□□ -1.42
HMGB4-203ENST00000519684 TCTAP57738 103 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 NEGR1Q7Z3B1 354 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 AGRNO00468 2067 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 FLNAP21333 2647 aaKnown RBP6.19□□□□□ -1.42
HMGB4-203ENST00000519684 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 M0R2P5 195 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 SAP30O75446 220 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
HMGB4-203ENST00000519684 ODF3L2Q3SX64 289 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 MPV17L2Q567V2 206 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 SMR3AQ99954 134 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 LINC00467Q9BRT7 94 aa6.19□□□□□ -1.42
HMGB4-203ENST00000519684 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
HMGB4-203ENST00000519684 M0QY20 66 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 DLEU1O43261 78 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 NSUN5P1Q3KNT7 163 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 ERASQ7Z444 233 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 TMEM208Q9BTX3 173 aa6.18□□□□□ -1.42
HMGB4-203ENST00000519684 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 A8MWV9 139 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 F8VRH5 84 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 LY6G6DO95868 133 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 FGF6P10767 208 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-203ENST00000519684 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 C2orf91Q6ZV80 131 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 SPXQ9BT56 116 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 SIVA1O15304 175 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 BVES-AS1Q5T3Y7 98 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 ZC2HC1BQ5TFG8 222 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 GTSCR1Q86UQ5 136 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 PTH2Q96A98 100 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 HHLA3Q9XRX5 114 aa6.17□□□□□ -1.42
HMGB4-203ENST00000519684 PROK1P58294 105 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 RHOHQ15669 191 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 NEXN-AS1Q8NBZ9 246 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms