RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SMKR1H3BMG3 65 aa14.25□□□□□ -0.13
SSBP2-218ENST00000514493 NCR2O95944 276 aa14.25□□□□□ -0.13
SSBP2-218ENST00000514493 C14orf178Q8N769 122 aaPredicted RBP14.25□□□□□ -0.13
SSBP2-218ENST00000514493 LAMTOR2Q9Y2Q5 125 aa14.25□□□□□ -0.13
SSBP2-218ENST00000514493 AZU1P20160 251 aa14.24□□□□□ -0.13
SSBP2-218ENST00000514493 PACRGQ96M98 296 aaPredicted RBP14.24□□□□□ -0.13
SSBP2-218ENST00000514493 GSN-AS1Q9NRJ2 163 aa14.24□□□□□ -0.13
SSBP2-218ENST00000514493 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
SSBP2-218ENST00000514493 MRAP2Q96G30 205 aa14.24□□□□□ -0.13
SSBP2-218ENST00000514493 NPYP01303 97 aa14.23□□□□□ -0.13
SSBP2-218ENST00000514493 SMIM17P0DL12 118 aa14.23□□□□□ -0.13
SSBP2-218ENST00000514493 DEFB135Q30KP9 77 aa14.23□□□□□ -0.13
SSBP2-218ENST00000514493 RNASEKQ6P5S7 137 aaKnown RBP14.23□□□□□ -0.13
SSBP2-218ENST00000514493 NIT1Q86X76 327 aa14.23□□□□□ -0.13
SSBP2-218ENST00000514493 RRN3P1Q2M238 152 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 ZNF876PQ49A33 203 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 OR10D4PQ8NGN7 298 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
SSBP2-218ENST00000514493 C16orf74Q96GX8 76 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 URB1-AS1Q96HZ7 61 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 SAMD10Q9BYL1 202 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 KIF25-AS1Q9Y6Z4 181 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 NACAE9PAV3 2078 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 SPXQ9BT56 116 aa14.22□□□□□ -0.13
SSBP2-218ENST00000514493 M0R2P5 195 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 HSBP1O75506 76 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 GAS8-AS1O95177 125 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 MGPP08493 103 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 POM121L12Q8N7R1 296 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 PTH2Q96A98 100 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 JPT2Q9H910 190 aa14.21□□□□□ -0.13
SSBP2-218ENST00000514493 TRAV26-2A0A0B4J265 109 aa14.2□□□□□ -0.14
SSBP2-218ENST00000514493 TNFRSF6BO95407 300 aa14.2□□□□□ -0.14
SSBP2-218ENST00000514493 LINC00614P0C842 121 aa14.2□□□□□ -0.14
SSBP2-218ENST00000514493 Q6ZWC4 215 aa14.2□□□□□ -0.14
SSBP2-218ENST00000514493 X6R8D5 127 aa14.2□□□□□ -0.14
SSBP2-218ENST00000514493 NBEAL2Q6ZNJ1 2754 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 PMCHP20382 165 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 AMTP48728 403 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 LINC00315P59091 139 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 PLAC8L1A1L4L8 177 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 GATA1P15976 413 aaPredicted RBP14.19□□□□□ -0.14
SSBP2-218ENST00000514493 NRACQ8N912 160 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 PRSS3P2Q8NHM4 247 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 MAP1LC3AQ9H492 121 aa14.19□□□□□ -0.14
SSBP2-218ENST00000514493 A0A087WWL8 130 aa14.18□□□□□ -0.14
SSBP2-218ENST00000514493 SMIM9A6NGZ8 99 aa14.18□□□□□ -0.14
SSBP2-218ENST00000514493 LOC389332A0A1B0GUA5 103 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 PRB2P02812 416 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-218ENST00000514493 FA2HQ7L5A8 372 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 RNF183Q96D59 192 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 AP5S1Q9NUS5 200 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 CRYGDP07320 174 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 IFI27P40305 119 aaPredicted RBP14.17□□□□□ -0.14
SSBP2-218ENST00000514493 DAZ2Q13117 558 aaKnown RBP14.17□□□□□ -0.14
SSBP2-218ENST00000514493 FAM74A4Q5TZK3 123 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 FAM19A2Q8N3H0 131 aa14.17□□□□□ -0.14
SSBP2-218ENST00000514493 K7EIL1 84 aa14.16□□□□□ -0.14
SSBP2-218ENST00000514493 SMIM6P0DI80 62 aa14.16□□□□□ -0.14
SSBP2-218ENST00000514493 NDUFAF3Q9BU61 184 aa14.16□□□□□ -0.14
SSBP2-218ENST00000514493 MRPL16Q9NX20 251 aaKnown RBP14.16□□□□□ -0.14
SSBP2-218ENST00000514493 FBN3Q75N90 2809 aa14.15□□□□□ -0.14
SSBP2-218ENST00000514493 A8MWV9 139 aa14.15□□□□□ -0.14
SSBP2-218ENST00000514493 OR11H2Q8NH07 326 aa14.15□□□□□ -0.14
SSBP2-218ENST00000514493 PPP1R17O96001 155 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 RASL10AQ92737 203 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 NXT2Q9NPJ8 142 aaKnown RBP14.14□□□□□ -0.15
SSBP2-218ENST00000514493 MEGF8Q7Z7M0 2845 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 IGHV1-24A0A0C4DH33 117 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 PRSS47A8MTI9 375 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 LGALS9BQ3B8N2 356 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 SUMO4Q6EEV6 95 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 NOP10Q9NPE3 64 aaKnown RBP14.14□□□□□ -0.15
SSBP2-218ENST00000514493 TP53TG1Q9Y2A0 90 aa14.14□□□□□ -0.15
SSBP2-218ENST00000514493 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
SSBP2-218ENST00000514493 F5H697 171 aa14.13□□□□□ -0.15
SSBP2-218ENST00000514493 ZNF56Q15929 161 aa14.13□□□□□ -0.15
SSBP2-218ENST00000514493 OVOL2Q9BRP0 275 aa14.13□□□□□ -0.15
SSBP2-218ENST00000514493 LINC00518Q8N0U6 118 aa14.12□□□□□ -0.15
SSBP2-218ENST00000514493 MIFP14174 115 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 PMCHL1Q16048 86 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 PYY3Q5JQD4 70 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 RPL39LQ96EH5 51 aaKnown RBP14.11□□□□□ -0.15
SSBP2-218ENST00000514493 C20orf78Q9BR46 151 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 LINC01546A6NGU7 62 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 SUMO2P61956 95 aaKnown RBP14.11□□□□□ -0.15
SSBP2-218ENST00000514493 Q6ZTI0 123 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 Q8N8P6 123 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 Q8NAQ8 132 aa14.11□□□□□ -0.15
SSBP2-218ENST00000514493 IGLV2-18A0A075B6J9 118 aa14.1□□□□□ -0.15
SSBP2-218ENST00000514493 IGHV4-28A0A0C4DH34 117 aa14.1□□□□□ -0.15
SSBP2-218ENST00000514493 CFAP126Q5VTH2 177 aa14.1□□□□□ -0.15
SSBP2-218ENST00000514493 UFSP1Q6NVU6 142 aa14.1□□□□□ -0.15
SSBP2-218ENST00000514493 SMIM2Q9BVW6 85 aa14.1□□□□□ -0.15
SSBP2-218ENST00000514493 RHODO00212 210 aa14.09□□□□□ -0.15
SSBP2-218ENST00000514493 C12orf57Q99622 126 aa14.09□□□□□ -0.15
SSBP2-218ENST00000514493 RS1O15537 224 aa14.09□□□□□ -0.15
SSBP2-218ENST00000514493 EMP1P54849 157 aa14.09□□□□□ -0.15
SSBP2-218ENST00000514493 JOSD1Q15040 202 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms