RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 INSP01308 110 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 PF4P02776 101 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 KRTDAPP60985 99 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 NUTF2P61970 127 aaKnown RBP6.13□□□□□ -1.43
RNF4-220ENST00000513578 ZNF124Q15973 351 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 PMCHL1Q16048 86 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 PET117Q6UWS5 81 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 STHQ8IWL8 128 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 EDA2RQ9HAV5 297 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 NBEAL2Q6ZNJ1 2754 aa6.13□□□□□ -1.43
RNF4-220ENST00000513578 A0A096LNJ9 63 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 TRBV6-5A0A0K0K1A5 114 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 LOC389332A0A1B0GUA5 103 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 CBY3A6NI87 242 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 GAS8-AS1O95177 125 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 HBDP02042 147 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 SMIM17P0DL12 118 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 FCER1GP30273 86 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 MORN3Q6PF18 240 aaPredicted RBP6.12□□□□□ -1.43
RNF4-220ENST00000513578 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 C14orf178Q8N769 122 aaPredicted RBP6.12□□□□□ -1.43
RNF4-220ENST00000513578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.12□□□□□ -1.43
RNF4-220ENST00000513578 SPXQ9BT56 116 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
RNF4-220ENST00000513578 TIMM8BQ9Y5J9 83 aaPredicted RBP6.12□□□□□ -1.43
RNF4-220ENST00000513578 KIR2DL5BA0A0G2JN68 375 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 KIR2DL5BA0A0G2JPC4 375 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 CRYGDP07320 174 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
RNF4-220ENST00000513578 FXYD7P58549 80 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 C9orf66Q5T8R8 295 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 KIR2DL5AQ8N109 375 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 C11orf72Q8NBR9 251 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 RASL10AQ92737 203 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 MCRIP2Q9BUT9 160 aaKnown RBP6.11□□□□□ -1.43
RNF4-220ENST00000513578 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
RNF4-220ENST00000513578 NACAE9PAV3 2078 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 C20orf202A1L168 122 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 LINC01549A6NIU2 74 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 A8MWV9 139 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 M0R2P5 195 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
RNF4-220ENST00000513578 LAGE3Q14657 143 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 ZNF876PQ49A33 203 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 C1orf158Q8N1D5 194 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 WFDC9Q8NEX5 89 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 LINC01587Q99440 93 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 C1QTNF4Q9BXJ3 329 aa6.1□□□□□ -1.43
RNF4-220ENST00000513578 TRAV26-2A0A0B4J265 109 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 SPRY2O43597 315 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 MGPP08493 103 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 G0S2P27469 103 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 POLR2KP53803 58 aaKnown RBP6.09□□□□□ -1.43
RNF4-220ENST00000513578 ORMDL2Q53FV1 153 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 LINC01545Q5VT33 79 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 VAMP8Q9BV40 100 aa6.09□□□□□ -1.43
RNF4-220ENST00000513578 M0QY20 66 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 GIG44P09565 113 aaPredicted RBP6.08□□□□□ -1.44
RNF4-220ENST00000513578 LGALS9BQ3B8N2 356 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 LGALS9CQ6DKI2 356 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 UFSP1Q6NVU6 142 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 JPT2Q9H910 190 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 ST20Q9HBF5 79 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 XCL2Q9UBD3 114 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 GOLT1BQ9Y3E0 138 aa6.08□□□□□ -1.44
RNF4-220ENST00000513578 TRAV9-2A0A087WT02 112 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 H7C1H1 209 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 RHODO00212 210 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 VCYO14598 125 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 TCAPO15273 167 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 RS1O15537 224 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 ATP5LO75964 103 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 DDTP30046 118 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 ZFP2Q6ZN57 461 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 CSNK1G2-AS1Q8NCQ2 148 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 RNASE8Q8TDE3 154 aaKnown RBP6.07□□□□□ -1.44
RNF4-220ENST00000513578 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
RNF4-220ENST00000513578 TMEM158Q8WZ71 300 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 RPL39LQ96EH5 51 aaKnown RBP6.07□□□□□ -1.44
RNF4-220ENST00000513578 CUBNO60494 3623 aa6.07□□□□□ -1.44
RNF4-220ENST00000513578 A0A087WWL8 130 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 LINC00587B1AMM8 73 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 F5H697 171 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 CIDEAO60543 219 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 DAZ2Q13117 558 aaKnown RBP6.06□□□□□ -1.44
RNF4-220ENST00000513578 ZNF705AQ6ZN79 300 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms