RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 TAS2R45P59539 299 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 KHDC3LQ587J8 217 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 TMEM97Q5BJF2 176 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 TRIM63Q969Q1 353 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 BCL7BQ9BQE9 202 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 IL36BQ9NZH7 164 aa6.92□□□□□ -1.3
NEDD9-212ENST00000508800 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 PTTG1O95997 202 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 GCGP01275 180 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 RPS10P46783 165 aaKnown RBP6.91□□□□□ -1.3
NEDD9-212ENST00000508800 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 LINC00269Q8N2A0 174 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 JPT2Q9H910 190 aa6.91□□□□□ -1.3
NEDD9-212ENST00000508800 LSM5Q9Y4Y9 91 aaKnown RBP6.91□□□□□ -1.3
NEDD9-212ENST00000508800 FAM24AA6NFZ4 105 aa6.9□□□□□ -1.3
NEDD9-212ENST00000508800 ZNF80P51504 273 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-212ENST00000508800 SMUG1Q53HV7 270 aa6.9□□□□□ -1.3
NEDD9-212ENST00000508800 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
NEDD9-212ENST00000508800 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
NEDD9-212ENST00000508800 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
NEDD9-212ENST00000508800 TRAV6A0A075B6T7 132 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 K7EQM0 130 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 RBX1P62877 108 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 REG3AQ06141 175 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 TMEM252Q8N6L7 170 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 OR11H4Q8NGC9 324 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 MITD1Q8WV92 249 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 C11orf1Q9H5F2 150 aa6.89□□□□□ -1.31
NEDD9-212ENST00000508800 MUC21A0A0G2JKD1 596 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 IGSF23A1L1A6 192 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 A6NJY4 79 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 NDUFB6O95139 128 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
NEDD9-212ENST00000508800 C17orf112F2Z3M2 114 aa6.87□□□□□ -1.31
NEDD9-212ENST00000508800 ATP6V1G2O95670 118 aa6.87□□□□□ -1.31
NEDD9-212ENST00000508800 THAP6Q8TBB0 222 aa6.87□□□□□ -1.31
NEDD9-212ENST00000508800 IGLV1-50A0A075B6I6 118 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 A0A096LNI7 61 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 PYDC2Q56P42 97 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 SAPCD1Q5SSQ6 148 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 DNLZQ5SXM8 178 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 PRR26Q8N8Z3 221 aa6.86□□□□□ -1.31
NEDD9-212ENST00000508800 NAP1L6A6NFF2 107 aa6.85□□□□□ -1.31
NEDD9-212ENST00000508800 H3BVH4 76 aa6.85□□□□□ -1.31
NEDD9-212ENST00000508800 SPCS2Q15005 226 aa6.85□□□□□ -1.31
NEDD9-212ENST00000508800 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
NEDD9-212ENST00000508800 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
NEDD9-212ENST00000508800 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 FAM25EA8MYX2 175 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 RAB4BP61018 213 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 GNG5P63218 68 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 FLI1Q01543 452 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-212ENST00000508800 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 OR5C1Q8NGR4 320 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 WDR61Q9GZS3 305 aaKnown RBP6.84□□□□□ -1.31
NEDD9-212ENST00000508800 PSG8Q9UQ74 426 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 PHLDA3Q9Y5J5 127 aa6.84□□□□□ -1.31
NEDD9-212ENST00000508800 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 TCRAP04437 139 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 TPT1P13693 172 aaKnown RBP6.83□□□□□ -1.32
NEDD9-212ENST00000508800 RAB2AP61019 212 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 GAGE6Q13070 117 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 CNPY1Q3B7I2 92 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 ZFP82Q8N141 532 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 SGK494Q96LW2 274 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 FLVCR2Q9UPI3 526 aa6.83□□□□□ -1.32
NEDD9-212ENST00000508800 TRAV1-1A0A0B4J248 108 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 B4DEV8 164 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
NEDD9-212ENST00000508800 IQCJQ1A5X6 159 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 PRR27Q6MZM9 219 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 INO80EQ8NBZ0 244 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-212ENST00000508800 DERL1Q9BUN8 251 aa6.82□□□□□ -1.32
NEDD9-212ENST00000508800 IGHV1-24A0A0C4DH33 117 aa6.81□□□□□ -1.32
NEDD9-212ENST00000508800 TRBV6-1A0A0K0K1D8 114 aa6.81□□□□□ -1.32
NEDD9-212ENST00000508800 M0R381 172 aa6.81□□□□□ -1.32
NEDD9-212ENST00000508800 MT-ND6P03923 174 aa6.81□□□□□ -1.32
NEDD9-212ENST00000508800 PRNTQ86SH4 94 aa6.81□□□□□ -1.32
NEDD9-212ENST00000508800 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-212ENST00000508800 NHLH2Q02577 135 aa6.8□□□□□ -1.32
NEDD9-212ENST00000508800 RAB32Q13637 225 aa6.8□□□□□ -1.32
NEDD9-212ENST00000508800 ZNF56Q15929 161 aa6.8□□□□□ -1.32
NEDD9-212ENST00000508800 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
NEDD9-212ENST00000508800 V9GYH0 126 aa6.8□□□□□ -1.32
NEDD9-212ENST00000508800 SULT1A2P50226 295 aa6.79□□□□□ -1.32
NEDD9-212ENST00000508800 RAB5CP51148 216 aa6.79□□□□□ -1.32
NEDD9-212ENST00000508800 HIGD2BQ4VC39 106 aa6.79□□□□□ -1.32
NEDD9-212ENST00000508800 AQP10Q96PS8 301 aa6.79□□□□□ -1.32
NEDD9-212ENST00000508800 RBM38Q9H0Z9 239 aaKnown RBP6.79□□□□□ -1.32
NEDD9-212ENST00000508800 A0A1W2PPV4 95 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms