RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CD28P10747 220 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 CSTL1Q9H114 145 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 A0A087WX48 190 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 F5H697 171 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 M0R2P5 195 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 DUX3Q96PT4 197 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 CENPEQ02224 2701 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 POLR2KP53803 58 aaKnown RBP8.36□□□□□ -1.07
NFKB1-205ENST00000505458 ERASQ7Z444 233 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
NFKB1-205ENST00000505458 RIPPLY3P57055 190 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 ZNF56Q15929 161 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 STHQ8IWL8 128 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 C18orf15Q96N68 181 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 CITED2Q99967 270 aaPredicted RBP8.35□□□□□ -1.07
NFKB1-205ENST00000505458 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
NFKB1-205ENST00000505458 A0A1B0GV90 55 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 C2orf66Q6UXQ4 117 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
NFKB1-205ENST00000505458 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 MUC4Q99102 2169 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 MYO9AB2RTY4 2548 aa8.34□□□□□ -1.07
NFKB1-205ENST00000505458 F8VRH5 84 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 CRYGDP07320 174 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 PROK1P58294 105 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 CRYBG3Q68DQ2 2970 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 NSUN5P1Q3KNT7 163 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 TMEM97Q5BJF2 176 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 NPSP0C0P6 89 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
NFKB1-205ENST00000505458 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
NFKB1-205ENST00000505458 M0QY20 66 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 BATFQ16520 125 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 ODF3L2Q3SX64 289 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 DNAJC30Q96LL9 226 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 FXYD7P58549 80 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 LINC01587Q99440 93 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 SEC11AP67812 179 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 ZNF124Q15973 351 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
NFKB1-205ENST00000505458 A0A087WWL8 130 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1BA6NDE4 496 aaKnown RBP8.31□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1EA6NEQ0 496 aaKnown RBP8.31□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1DP0C7P1 496 aaKnown RBP8.31□□□□□ -1.08
NFKB1-205ENST00000505458 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 MORN3Q6PF18 240 aaPredicted RBP8.31□□□□□ -1.08
NFKB1-205ENST00000505458 ZFP2Q6ZN57 461 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 DKK2Q9UBU2 259 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 CIDEAO60543 219 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 IGLV1-51P01701 117 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 HSD52Q0P140 79 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
NFKB1-205ENST00000505458 CCDC168Q8NDH2 2452 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 I3L3M4 83 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 NEXN-AS1Q8NBZ9 246 aa8.31□□□□□ -1.08
NFKB1-205ENST00000505458 GAGE1Q13065 139 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 MCRIP2Q9BUT9 160 aaKnown RBP8.3□□□□□ -1.08
NFKB1-205ENST00000505458 ZANQ9Y493 2812 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 SAP30O75446 220 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 FGF6P10767 208 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
NFKB1-205ENST00000505458 CRYBA4P53673 196 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 TMEM208Q9BTX3 173 aa8.3□□□□□ -1.08
NFKB1-205ENST00000505458 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
NFKB1-205ENST00000505458 LY6G6DO95868 133 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1A1P0DJD3 496 aaKnown RBP8.29□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 INSL3P51460 131 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 RBMY1FQ15415 496 aaKnown RBP8.29□□□□□ -1.08
NFKB1-205ENST00000505458 TLN2Q9Y4G6 2542 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 HERVK_113P61574 105 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 JPT2Q9H910 190 aa8.29□□□□□ -1.08
NFKB1-205ENST00000505458 A6NDN8 102 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 ZC2HC1BQ5TFG8 222 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 ORAOV1Q8WV07 137 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 AGRNO00468 2067 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 RS1O15537 224 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 SPRY2O43597 315 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 NMUP48645 174 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 PMVKQ15126 192 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 BVES-AS1Q5T3Y7 98 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 STPG4Q8N801 248 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 C11orf72Q8NBR9 251 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 BAALCQ8WXS3 180 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms