RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.43
DHFR-202ENST00000504396 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.43
DHFR-202ENST00000504396 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.43
DHFR-202ENST00000504396 URGCP-MRPS24S4R325 110 aa6.15□□□□□ -1.43
DHFR-202ENST00000504396 TRGV4A0A0C4DH28 118 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 DLEU1O43261 78 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 SRIP30626 198 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 RNASE4P34096 147 aaKnown RBP6.14□□□□□ -1.43
DHFR-202ENST00000504396 TCL1AP56279 114 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 RAB31Q13636 194 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 MRPL23Q16540 153 aaKnown RBP6.14□□□□□ -1.43
DHFR-202ENST00000504396 IBA57Q5T440 356 aaKnown RBP6.14□□□□□ -1.43
DHFR-202ENST00000504396 LYPD5Q6UWN5 251 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 NEGR1Q7Z3B1 354 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 OR5C1Q8NGR4 320 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
DHFR-202ENST00000504396 FAT1Q14517 4588 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 XKRY2A2RUG3 117 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 KLLNB2CW77 178 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 TMEM250H0YL14 139 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 SPINK4O60575 86 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 MBP02144 154 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 SERF2P84101 59 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 ZNF415Q09FC8 603 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 ERCC8Q13216 396 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 WFDC10BQ8IUB3 73 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 OR1L4Q8NGR5 311 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 TMEM37Q8WXS4 190 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 LINC00477Q96M19 166 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 VGLL1Q99990 258 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 HHLA3Q9XRX5 114 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
DHFR-202ENST00000504396 TRAV5A0A0B4J249 113 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 A0A1B0GV50 99 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 MPDU1O75352 247 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 GPX1P07203 203 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 CRYGDP07320 174 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 CRYBA4P53673 196 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 RANP62826 216 aaKnown RBP6.12□□□□□ -1.43
DHFR-202ENST00000504396 PDE6HQ13956 83 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 TMEM70Q9BUB7 260 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 TIMM9Q9Y5J7 89 aa6.12□□□□□ -1.43
DHFR-202ENST00000504396 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
DHFR-202ENST00000504396 M0R3E3 92 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 GYPEP15421 78 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 CRISP2P16562 243 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 CEBPGP53567 150 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 TMEM241Q24JQ0 296 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 C10orf126Q8N4M7 172 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
DHFR-202ENST00000504396 FAM19A4Q96LR4 140 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 MGST2Q99735 147 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 GNG13Q9P2W3 67 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
DHFR-202ENST00000504396 TRBV19A0A075B6N1 114 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 TRBV7-9A0A0J9YWB2 115 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 K7EQD1 137 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 ORM1P02763 201 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 ESDP10768 282 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 ZNF25P17030 456 aaPredicted RBP6.1□□□□□ -1.43
DHFR-202ENST00000504396 TMEM78Q5T7P6 136 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 MIC13Q5XKP0 118 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 C9orf47Q6ZRZ4 202 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 BLNKQ8WV28 456 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 Q9HAA7 133 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 TMEM14CQ9P0S9 112 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 NAGKQ9UJ70 344 aa6.1□□□□□ -1.43
DHFR-202ENST00000504396 TRAV9-1A0A075B6T8 112 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 IGHV1OR15-1A0A075B7D0 117 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 IGKV2-40A0A087WW87 121 aaPredicted RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 MAP1LC3B2A6NCE7 125 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 IGKV2D-40P01614 121 aaPredicted RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 HIST1H1EP10412 219 aaKnown RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 RPL29P47914 159 aaKnown RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 RPL23P62829 140 aaKnown RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 ARL16Q0P5N6 197 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 ZNF726P1Q15940 193 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 KCNIP4Q6PIL6 250 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 TEX43Q6ZNM6 134 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 SCGB1C1Q8TD33 95 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 TXNDC17Q9BRA2 123 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 MRPL32Q9BYC8 188 aaKnown RBP6.09□□□□□ -1.43
DHFR-202ENST00000504396 MAP1LC3BQ9GZQ8 125 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 AAMDCQ9H7C9 122 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 MANBALQ9NQG1 85 aa6.09□□□□□ -1.43
DHFR-202ENST00000504396 C9JCJ5 164 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 CST7O76096 145 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 MEF2BQ02080 365 aaPredicted RBP6.08□□□□□ -1.44
DHFR-202ENST00000504396 ADIRFQ15847 76 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 MUC21Q5SSG8 566 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 PRR9Q5T870 116 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 SH2D6Q7Z4S9 175 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 EXOC3-AS1Q8N2X6 119 aa6.08□□□□□ -1.44
DHFR-202ENST00000504396 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms