RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RNASE13Q5GAN3 156 aaKnown RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC00311Q8N616 119 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 C9orf85Q96MD7 179 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 C8orf49Q96NF6 230 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 RBAKDNA6NC62 111 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 H7C1H1 209 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 EIF4EBP3O60516 100 aaPredicted RBP2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 SLC25A16P16260 332 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 SYNJ2BPP57105 145 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 Q6ZR03 302 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 NEXN-AS1Q8NBZ9 246 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 PRORYQ9H606 182 aa2.86□□□□□ -1.95
PCDH11X-208ENST00000504220 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF503-AS2A6NEH8 195 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 DUSP14O95147 198 aaKnown RBP2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF415Q09FC8 603 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC01545Q5VT33 79 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 C11orf53Q8IXP5 236 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 C17orf77Q96MU5 243 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 V9GYV3 84 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 TRGV1A0A0A0MS02 117 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV1-3A0A0C4DH29 117 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV3-38A0A0C4DH36 116 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM236DA0A1B0GTK5 79 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 IGLL5B9A064 214 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 G3V318 75 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM236CP0DP71 79 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 CRYGAP11844 174 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 GATA1P15976 413 aaPredicted RBP2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 HLA-DMBP28068 263 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 LOXP28300 417 aaPredicted RBP2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 CFHR3Q02985 330 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 ORMDL2Q53FV1 153 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 PVRIGQ6DKI7 326 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 TMEM167AQ8TBQ9 72 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 PSMG3-AS1Q96PY0 264 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 DKK2Q9UBU2 259 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV12-1A0A0B4J245 112 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 H3BUX3 64 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 J3KT08 172 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 J3QQQ9 107 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 PRB2P02812 416 aaPredicted RBP2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 IFITM1P13164 125 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 MYCNOSP40205 109 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 GAGE2AQ6NT46 116 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 RASL11AQ6T310 242 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF493Q6ZR52 646 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 C1orf158Q8N1D5 194 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 MRPL35Q9NZE8 188 aaKnown RBP2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 CENPEQ02224 2701 aa2.85□□□□□ -1.95
PCDH11X-208ENST00000504220 MAST4O15021 2626 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 TRBV7-7A0A0K0K1E9 115 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 NXPH4O95158 308 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 COX6B1P14854 86 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 PFN2P35080 140 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF134P52741 427 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 PRIMA1Q86XR5 153 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 OR11H6Q8NGC7 330 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 FAM57AQ8TBR7 257 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 CCL19Q99731 98 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 PROK2Q9HC23 129 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 LAMTOR3Q9UHA4 124 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV12-2A0A075B6T6 113 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 IGLV3-32A0A0A0MS00 114 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 GNLYP22749 145 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 DAZAP2Q15038 168 aaPredicted RBP2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 ATXN8Q156A1 80 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 STHQ8IWL8 128 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 SLC50A1Q9BRV3 221 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 HIGD1BQ9P298 99 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 KLK9Q9UKQ9 250 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 CELSR1Q9NYQ6 3014 aa2.84□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV1-24A0A0C4DH33 117 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 INS-IGF2F8WCM5 200 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 NPYP01303 97 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 INSP01308 110 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 HLA-DRB4P13762 266 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 GRNP28799 593 aaKnown RBP2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 HILS1P60008 231 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 WT1-ASQ06250 92 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 SPINK13Q1W4C9 94 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 NSUN5P1Q3KNT7 163 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 S100A7L2Q5SY68 101 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 C2orf66Q6UXQ4 117 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 VMO1Q7Z5L0 202 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 WDR86Q86TI4 376 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 HLA-DRB4X5D2U9 266 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 IGKV2D-26A0A0A0MRZ7 120 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 TRAV41A0A0B4J266 112 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 RBMY1BA6NDE4 496 aaKnown RBP2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 RBMY1EA6NEQ0 496 aaKnown RBP2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 F6UB75 175 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 NDUFS7O75251 213 aa2.84□□□□□ -1.96
PCDH11X-208ENST00000504220 IGLV2-8P01709 118 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms