RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 A0A087WWL8 130 aa13.32□□□□□ -0.28
LINC00535-201ENST00000501400 INSP01308 110 aa13.32□□□□□ -0.28
LINC00535-201ENST00000501400 SPATA3Q8NHX4 192 aa13.32□□□□□ -0.28
LINC00535-201ENST00000501400 VAMP8Q9BV40 100 aa13.32□□□□□ -0.28
LINC00535-201ENST00000501400 PAM16Q9Y3D7 125 aa13.32□□□□□ -0.28
LINC00535-201ENST00000501400 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 SYT8Q8NBV8 401 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 HTN1P15515 57 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 LINC00467Q9BRT7 94 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 SMIM2Q9BVW6 85 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 XCL2Q9UBD3 114 aa13.31□□□□□ -0.28
LINC00535-201ENST00000501400 DDTP30046 118 aa13.3□□□□□ -0.28
LINC00535-201ENST00000501400 SUMO4Q6EEV6 95 aa13.3□□□□□ -0.28
LINC00535-201ENST00000501400 ATRQ13535 2644 aa13.3□□□□□ -0.28
LINC00535-201ENST00000501400 CRYGDP07320 174 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 SMIM17P0DL12 118 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
LINC00535-201ENST00000501400 ZNF876PQ49A33 203 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 C11orf72Q8NBR9 251 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 CITED1Q99966 193 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
LINC00535-201ENST00000501400 MCRIP2Q9BUT9 160 aaKnown RBP13.29□□□□□ -0.28
LINC00535-201ENST00000501400 BAHCC1Q9P281 2608 aa13.29□□□□□ -0.28
LINC00535-201ENST00000501400 FCER1GP30273 86 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 CMC4P56277 68 aaPredicted RBP13.28□□□□□ -0.28
LINC00535-201ENST00000501400 MAJINQ3KP22 176 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 C1orf158Q8N1D5 194 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 LINC01587Q99440 93 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
LINC00535-201ENST00000501400 TCAPO15273 167 aa13.27□□□□□ -0.28
LINC00535-201ENST00000501400 GIG44P09565 113 aaPredicted RBP13.27□□□□□ -0.28
LINC00535-201ENST00000501400 FAM74A4Q5TZK3 123 aa13.27□□□□□ -0.28
LINC00535-201ENST00000501400 NACAE9PAV3 2078 aa13.27□□□□□ -0.29
LINC00535-201ENST00000501400 H0Y8G0 127 aa13.27□□□□□ -0.29
LINC00535-201ENST00000501400 ZNF415Q09FC8 603 aa13.27□□□□□ -0.29
LINC00535-201ENST00000501400 LINC01545Q5VT33 79 aa13.27□□□□□ -0.29
LINC00535-201ENST00000501400 TMEM158Q8WZ71 300 aa13.27□□□□□ -0.29
LINC00535-201ENST00000501400 LAGE3Q14657 143 aa13.25□□□□□ -0.29
LINC00535-201ENST00000501400 SPATA45Q537H7 98 aa13.25□□□□□ -0.29
LINC00535-201ENST00000501400 C20orf202A1L168 122 aa13.24□□□□□ -0.29
LINC00535-201ENST00000501400 AZU1P20160 251 aa13.24□□□□□ -0.29
LINC00535-201ENST00000501400 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
LINC00535-201ENST00000501400 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
LINC00535-201ENST00000501400 PMCHL2Q9BQD1 86 aa13.24□□□□□ -0.29
LINC00535-201ENST00000501400 M0R2P5 195 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 PPP1R17O96001 155 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 NUTF2P61970 127 aaKnown RBP13.23□□□□□ -0.29
LINC00535-201ENST00000501400 ZNF56Q15929 161 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 F5H697 171 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 M0QY20 66 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 IL17DQ8TAD2 202 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 PTH2Q96A98 100 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 C18orf15Q96N68 181 aa13.23□□□□□ -0.29
LINC00535-201ENST00000501400 NOTCH3Q9UM47 2321 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
LINC00535-201ENST00000501400 PIK3CD-AS1Q5SR53 167 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 NEGR1Q7Z3B1 354 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 TMEM208Q9BTX3 173 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 NDUFAF3Q9BU61 184 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
LINC00535-201ENST00000501400 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
LINC00535-201ENST00000501400 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
LINC00535-201ENST00000501400 POLR2KP53803 58 aaKnown RBP13.21□□□□□ -0.29
LINC00535-201ENST00000501400 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
LINC00535-201ENST00000501400 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.29
LINC00535-201ENST00000501400 TRBV6-5A0A0K0K1A5 114 aa13.21□□□□□ -0.3
LINC00535-201ENST00000501400 IGLL1P15814 213 aa13.21□□□□□ -0.3
LINC00535-201ENST00000501400 RNASE8Q8TDE3 154 aaKnown RBP13.21□□□□□ -0.3
LINC00535-201ENST00000501400 C14orf144Q96I85 54 aa13.21□□□□□ -0.3
LINC00535-201ENST00000501400 ST20Q9HBF5 79 aa13.21□□□□□ -0.3
LINC00535-201ENST00000501400 LGALS9BQ3B8N2 356 aa13.2□□□□□ -0.3
LINC00535-201ENST00000501400 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
LINC00535-201ENST00000501400 TRRAPQ9Y4A5 3859 aa13.2□□□□□ -0.3
LINC00535-201ENST00000501400 K7EMI3 77 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 INSL3P51460 131 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 SPXQ9BT56 116 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
LINC00535-201ENST00000501400 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 NUDT3O95989 172 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 DEFA6Q01524 100 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 ORMDL2Q53FV1 153 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 CSNK1G2-AS1Q8NCQ2 148 aa13.19□□□□□ -0.3
LINC00535-201ENST00000501400 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
LINC00535-201ENST00000501400 A8MWV9 139 aa13.18□□□□□ -0.3
LINC00535-201ENST00000501400 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
LINC00535-201ENST00000501400 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
LINC00535-201ENST00000501400 EDA2RQ9HAV5 297 aa13.18□□□□□ -0.3
LINC00535-201ENST00000501400 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
LINC00535-201ENST00000501400 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
LINC00535-201ENST00000501400 TRBV27A0A0K0K1C4 114 aa13.17□□□□□ -0.3
LINC00535-201ENST00000501400 TMEM263Q8WUH6 116 aaKnown RBP13.16□□□□□ -0.3
LINC00535-201ENST00000501400 TOMM6Q96B49 74 aa13.16□□□□□ -0.3
LINC00535-201ENST00000501400 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms