RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 KIF25-AS1Q9Y6Z4 181 aa12.96□□□□□ -0.33
CHRNA4-206ENST00000498043 LINC00467Q9BRT7 94 aa12.95□□□□□ -0.34
CHRNA4-206ENST00000498043 KRTDAPP60985 99 aa12.95□□□□□ -0.34
CHRNA4-206ENST00000498043 C3orf56Q8N813 242 aa12.95□□□□□ -0.34
CHRNA4-206ENST00000498043 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
CHRNA4-206ENST00000498043 ZNF747Q9BV97 191 aa12.95□□□□□ -0.34
CHRNA4-206ENST00000498043 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
CHRNA4-206ENST00000498043 NOTCH3Q9UM47 2321 aa12.94□□□□□ -0.34
CHRNA4-206ENST00000498043 AZU1P20160 251 aa12.93□□□□□ -0.34
CHRNA4-206ENST00000498043 LINC00315P59091 139 aa12.93□□□□□ -0.34
CHRNA4-206ENST00000498043 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
CHRNA4-206ENST00000498043 SCGB1D1O95968 90 aa12.93□□□□□ -0.34
CHRNA4-206ENST00000498043 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
CHRNA4-206ENST00000498043 RASL10AQ92737 203 aa12.92□□□□□ -0.34
CHRNA4-206ENST00000498043 F5H697 171 aa12.92□□□□□ -0.34
CHRNA4-206ENST00000498043 MORN3Q6PF18 240 aaPredicted RBP12.92□□□□□ -0.34
CHRNA4-206ENST00000498043 M0R2P5 195 aa12.91□□□□□ -0.34
CHRNA4-206ENST00000498043 ZNF56Q15929 161 aa12.91□□□□□ -0.34
CHRNA4-206ENST00000498043 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
CHRNA4-206ENST00000498043 POM121L12Q8N7R1 296 aa12.91□□□□□ -0.34
CHRNA4-206ENST00000498043 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
CHRNA4-206ENST00000498043 LEPROTL1O95214 131 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 CRYGDP07320 174 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 NXT2Q9NPJ8 142 aaKnown RBP12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 GOLT1BQ9Y3E0 138 aa12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
CHRNA4-206ENST00000498043 A0A096LNJ9 63 aa12.89□□□□□ -0.35
CHRNA4-206ENST00000498043 SHISA2Q6UWI4 295 aa12.89□□□□□ -0.35
CHRNA4-206ENST00000498043 Q8N8P6 123 aa12.89□□□□□ -0.35
CHRNA4-206ENST00000498043 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
CHRNA4-206ENST00000498043 RNASE8Q8TDE3 154 aaKnown RBP12.89□□□□□ -0.35
CHRNA4-206ENST00000498043 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
CHRNA4-206ENST00000498043 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
CHRNA4-206ENST00000498043 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
CHRNA4-206ENST00000498043 SUMO2P61956 95 aaKnown RBP12.88□□□□□ -0.35
CHRNA4-206ENST00000498043 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
CHRNA4-206ENST00000498043 SPXQ9BT56 116 aa12.87□□□□□ -0.35
CHRNA4-206ENST00000498043 SMIM2Q9BVW6 85 aa12.87□□□□□ -0.35
CHRNA4-206ENST00000498043 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
CHRNA4-206ENST00000498043 CSTL1Q9H114 145 aa12.87□□□□□ -0.35
CHRNA4-206ENST00000498043 PRSS47A8MTI9 375 aa12.86□□□□□ -0.35
CHRNA4-206ENST00000498043 WIPF1O43516 503 aa12.86□□□□□ -0.35
CHRNA4-206ENST00000498043 HBDP02042 147 aa12.86□□□□□ -0.35
CHRNA4-206ENST00000498043 IL17DQ8TAD2 202 aa12.86□□□□□ -0.35
CHRNA4-206ENST00000498043 LINC01546A6NGU7 62 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 TCAPO15273 167 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 Q8N976 141 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 C20orf78Q9BR46 151 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 A8MWV9 139 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 HSPB8Q9UJY1 196 aa12.85□□□□□ -0.35
CHRNA4-206ENST00000498043 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 PPP1R17O96001 155 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 OXLD1Q5BKU9 147 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 PTH2Q96A98 100 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 TMEM70Q9BUB7 260 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 PIK3CD-AS1Q5SR53 167 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CHRNA4-206ENST00000498043 H0Y8G0 127 aa12.83□□□□□ -0.36
CHRNA4-206ENST00000498043 M0QY20 66 aa12.83□□□□□ -0.36
CHRNA4-206ENST00000498043 SPATA12Q7Z6I5 190 aa12.83□□□□□ -0.36
CHRNA4-206ENST00000498043 C16orf74Q96GX8 76 aa12.83□□□□□ -0.36
CHRNA4-206ENST00000498043 ST20Q9HBF5 79 aa12.83□□□□□ -0.36
CHRNA4-206ENST00000498043 S100A12P80511 92 aa12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 LAGE3Q14657 143 aa12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 NOP10Q9NPE3 64 aaKnown RBP12.82□□□□□ -0.36
CHRNA4-206ENST00000498043 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
CHRNA4-206ENST00000498043 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
CHRNA4-206ENST00000498043 FCER1GP30273 86 aa12.81□□□□□ -0.36
CHRNA4-206ENST00000498043 Q6ZTI0 123 aa12.81□□□□□ -0.36
CHRNA4-206ENST00000498043 DEFB104AQ8WTQ1 72 aa12.8□□□□□ -0.36
CHRNA4-206ENST00000498043 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
CHRNA4-206ENST00000498043 SDHAF1A6NFY7 115 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 P0DMU3 169 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 TEX43Q6ZNM6 134 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 PKD1L1Q8TDX9 2849 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 RHODO00212 210 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 RS1O15537 224 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 NUDT3O95989 172 aa12.79□□□□□ -0.36
CHRNA4-206ENST00000498043 Q6ZSN1 163 aa12.78□□□□□ -0.36
CHRNA4-206ENST00000498043 PRO1933Q9H354 126 aa12.78□□□□□ -0.36
CHRNA4-206ENST00000498043 COL6A5A8TX70 2615 aa12.78□□□□□ -0.36
CHRNA4-206ENST00000498043 TRBV6-5A0A0K0K1A5 114 aa12.77□□□□□ -0.36
CHRNA4-206ENST00000498043 H7C1H1 209 aa12.77□□□□□ -0.36
CHRNA4-206ENST00000498043 POLR2KP53803 58 aaKnown RBP12.77□□□□□ -0.36
CHRNA4-206ENST00000498043 EMP1P54849 157 aa12.77□□□□□ -0.36
CHRNA4-206ENST00000498043 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms