RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TIMM9Q9Y5J7 89 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 MINOS1-NBL1R4GNA1 71 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 V9GYV3 84 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 COL12A1Q99715 3063 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 NF1P21359 2839 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 WNK1Q9H4A3 2382 aa1.56□□□□□ -2.16
RIF1-212ENST00000498041 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 IGLV2-18A0A075B6J9 118 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 TRAV26-1A0A087WT03 109 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 IGHV3-73A0A0B4J1V6 119 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 A0A1W2PPV4 95 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 CYB5BO43169 146 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 COX7A2P2O60397 106 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 HYPMO75409 117 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 NCR2O95944 276 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SLC25A5P05141 298 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 ZNF688P0C7X2 276 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 TRGC1P0CF51 173 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 P0DMU3 169 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 FAM231AP0DMU4 169 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 FAM231CP0DMU5 169 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 CD99P14209 185 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SLC25A16P16260 332 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 S100A1P23297 94 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 PSMB8P28062 276 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 BRS3P32247 399 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 RPL35P42766 123 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 GALR1P47211 349 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SUB1P53999 127 aaKnown RBP eCLIP1.55□□□□□ -2.16
RIF1-212ENST00000498041 UBE2L3P68036 154 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 FABP9Q0Z7S8 132 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 PEA15Q15121 130 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 MAJINQ3KP22 176 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SOHLH1Q5JUK2 328 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 MRPL54Q6P161 138 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 SSX8Q7RTT4 187 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 OR8I2Q8N0Y5 310 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 EIF4E3Q8N5X7 224 aaKnown RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 TCTEX1D1Q8N7M0 179 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 ZNF709Q8N972 641 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 OR11H1Q8NG94 326 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 OR5B3Q8NH48 314 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 OR4A5Q8NH83 315 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SUN5Q8TC36 379 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 ASB13Q8WXK3 278 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 UBE2E2Q96LR5 201 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SHANK2-AS3Q9BTD1 123 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 RHPN1-AS1Q9BWJ2 59 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SAMD10Q9BYL1 202 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 SMPXQ9UHP9 88 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 VAX2Q9UIW0 290 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 EPDR1Q9UM22 224 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 PSG8Q9UQ74 426 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 HIGD1AQ9Y241 93 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 AMMECR1Q9Y4X0 333 aaPredicted RBP1.55□□□□□ -2.16
RIF1-212ENST00000498041 HERC1Q15751 4861 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 ADGRG4Q8IZF6 3080 aa1.55□□□□□ -2.16
RIF1-212ENST00000498041 CSMD2Q7Z408 3487 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 APCP25054 2843 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 VPS13CQ709C8 3753 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 TRBV19A0A075B6N1 114 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 TRAV1-1A0A0B4J248 108 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 TRAV26-2A0A0B4J265 109 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 IGHV7-4-1A0A0J9YVY3 117 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 C2orf70A6NJV1 201 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 ZNF705GA8MUZ8 300 aaPredicted RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 INS-IGF2F8WCM5 200 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 M0R2Z0 102 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 NDUFS8O00217 210 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 CRXO43186 299 aaPredicted RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 SH2D1AO60880 128 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 CXorf1O96002 111 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 GCGP01275 180 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 TCRAP04437 139 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 ARMS2P0C7Q2 107 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 HTN1P15515 57 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 EVI2AP22794 236 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 S100GP29377 79 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 RNASE4P34096 147 aaKnown RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 MAS1LP35410 378 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 CEACAM3P40198 252 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 DEFB131AP59861 70 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 PLP1P60201 277 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 RHOBP62745 196 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 HBG1P69891 147 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 HBG2P69892 147 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 NDUFA5Q16718 116 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 TMEM241Q24JQ0 296 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 KHDC3LQ587J8 217 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 BAGE2Q86Y30 109 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 FAM19A2Q8N3H0 131 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 DEFB125Q8N687 156 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 C15orf56Q8N910 161 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 OR1L6Q8NGR2 347 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 OR1L4Q8NGR5 311 aa1.54□□□□□ -2.16
RIF1-212ENST00000498041 RNASEH2CQ8TDP1 164 aaKnown RBP1.54□□□□□ -2.16
RIF1-212ENST00000498041 DNAJC30Q96LL9 226 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms