RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 A0A1W2PPR1 153 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 H3BUA1 57 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 AMN1Q8IY45 258 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 UBR5O95071 2799 aaPredicted RBP6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 DMDP11532 3685 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 A0A087WWL8 130 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 DEFB4AO15263 64 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 F8WEM9 126 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 NDUFA4O00483 81 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 BUB3O43684 328 aa6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 TRPT1Q86TN4 253 aaKnown RBP6.18□□□□□ -1.42
HLA-DMB-262ENST00000498020 HILS1P60008 231 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 PRR31Q5SQ13 230 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 LAMTOR3Q9UHA4 124 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 A0A1B0GXF2 115 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 IGLL5B9A064 214 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 LINC00322Q6ZN03 302 aaPredicted RBP6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 TIMM21Q9BVV7 248 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 DSCAML1Q8TD84 2053 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 SYS1-DBNDD2H3BUS1 97 aa6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 LGALS1P09382 135 aaKnown RBP6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 KLK5Q9Y337 293 aaPredicted RBP6.17□□□□□ -1.42
HLA-DMB-262ENST00000498020 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 MRPL52Q86TS9 123 aaKnown RBP6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 SPEGQ15772 3267 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 LEPROTO15243 131 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 LY6G6CO95867 125 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 SPINK13Q1W4C9 94 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 DEFB104AQ8WTQ1 72 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 DMXL2Q8TDJ6 3036 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 CDK2AP2O75956 126 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 ESM1Q9NQ30 184 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 FRYQ5TBA9 3013 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 KIR2DL5BA0A0G2JN68 375 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 KIR2DL5BA0A0G2JPC4 375 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 HLA-DMBP28068 263 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 Q6ZSV7 163 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 KIR2DL5AQ8N109 375 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 TP53TG3Q9ULZ0 132 aa6.16□□□□□ -1.42
HLA-DMB-262ENST00000498020 TMEM213A2RRL7 107 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 NPC2P61916 151 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 LINC01006Q8NI28 216 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 A0A087X0K7 114 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 MAJINQ3KP22 176 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 RNF183Q96D59 192 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 SPAG8Q99932 426 aaPredicted RBP6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 FAM110AQ9BQ89 295 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 SPXQ9BT56 116 aa6.15□□□□□ -1.42
HLA-DMB-262ENST00000498020 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.43
HLA-DMB-262ENST00000498020 TRBV25-1A0A075B6N4 114 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 hDV102S1A0JD36 115 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGLV2-11P01706 119 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGHG2P01859 326 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 EGR2P11161 476 aaPredicted RBP6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 NEGR1Q7Z3B1 354 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 DLX4Q92988 240 aaPredicted RBP6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 AGPAT4-IT1Q9H0P7 198 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 A0A096LPF7 62 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 CDKN1BP46527 198 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE1Q13065 139 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE4Q13068 117 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE5Q13069 117 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 C2orf66Q6UXQ4 117 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 CCDC140Q96MF4 163 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 LENEPQ9Y5L5 61 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 IL17DQ8TAD2 202 aa6.14□□□□□ -1.43
HLA-DMB-262ENST00000498020 LINC01548A6NM66 108 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 DCHS1Q96JQ0 3298 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 IGHV1-24A0A0C4DH33 117 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 SIGLEC8Q9NYZ4 499 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 FREM2Q5SZK8 3169 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 A6NDX4 124 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 MRPL51Q4U2R6 128 aaKnown RBP6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 APRG1Q8IVJ8 170 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 NAA38Q9BRA0 125 aaKnown RBP6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
HLA-DMB-262ENST00000498020 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms