RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 MUC6Q6W4X9 2439 aa9.8□□□□□ -0.84
VEGFA-215ENST00000497139 DPM3Q9P2X0 92 aa9.79□□□□□ -0.84
VEGFA-215ENST00000497139 HERVK_113P63121 156 aa9.78□□□□□ -0.84
VEGFA-215ENST00000497139 TMEM219Q86XT9 240 aa9.78□□□□□ -0.84
VEGFA-215ENST00000497139 IGHV3-23P01764 117 aa9.78□□□□□ -0.84
VEGFA-215ENST00000497139 BEX4Q9NWD9 120 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-215ENST00000497139 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-215ENST00000497139 A0A0J9YXY3 114 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 ATP5J2P56134 94 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 C9orf139Q6ZV77 190 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 RNASE6Q93091 150 aaKnown RBP9.77□□□□□ -0.84
VEGFA-215ENST00000497139 DUX3Q96PT4 197 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.84
VEGFA-215ENST00000497139 ZFHX2Q9C0A1 2572 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-215ENST00000497139 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
VEGFA-215ENST00000497139 RHOHQ15669 191 aa9.77□□□□□ -0.85
VEGFA-215ENST00000497139 PRR9Q5T870 116 aa9.77□□□□□ -0.85
VEGFA-215ENST00000497139 FDCSPQ8NFU4 85 aa9.77□□□□□ -0.85
VEGFA-215ENST00000497139 KIF25-AS1Q9Y6Z4 181 aa9.77□□□□□ -0.85
VEGFA-215ENST00000497139 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 PLCE1Q9P212 2302 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 UBE2E1P51965 193 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 RPL39P62891 51 aaKnown RBP9.76□□□□□ -0.85
VEGFA-215ENST00000497139 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 NSUN5P1Q3KNT7 163 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 C22orf34Q6ZV56 151 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 ZFAND2AQ8N6M9 145 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 CRYGAP11844 174 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 COX7CP15954 63 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-215ENST00000497139 LINC00315P59091 139 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 NDPQ00604 133 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-215ENST00000497139 U3KQE9 123 aa9.76□□□□□ -0.85
VEGFA-215ENST00000497139 PTPRZ1P23471 2315 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-215ENST00000497139 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
VEGFA-215ENST00000497139 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-215ENST00000497139 LITAFQ99732 161 aa9.75□□□□□ -0.85
VEGFA-215ENST00000497139 OOSP1A8MZH6 123 aa9.75□□□□□ -0.85
VEGFA-215ENST00000497139 OVOL1O14753 267 aa9.75□□□□□ -0.85
VEGFA-215ENST00000497139 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
VEGFA-215ENST00000497139 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-215ENST00000497139 FAM19A5Q7Z5A7 132 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-215ENST00000497139 DYNLRB1Q9NP97 96 aa9.74□□□□□ -0.85
VEGFA-215ENST00000497139 CELSR3Q9NYQ7 3312 aa9.74□□□□□ -0.85
VEGFA-215ENST00000497139 TRAV25A0A0B4J276 109 aa9.74□□□□□ -0.85
VEGFA-215ENST00000497139 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
VEGFA-215ENST00000497139 BSPH1Q075Z2 132 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 MIAQ16674 131 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 Q8N6K4 173 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 LY6G5BQ8NDX9 201 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 C16orf92Q96LL3 132 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 SPTBN2O15020 2390 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 DMXL1Q9Y485 3027 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 IGHV3OR16-8A0A075B7F1 116 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 PRB3Q04118 309 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-215ENST00000497139 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
VEGFA-215ENST00000497139 C15orf32Q32M92 178 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 SUMO4Q6EEV6 95 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 ZGRF1Q86YA3 2104 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 ODF3BA8MYP8 253 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 PEMTQ9UBM1 199 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 ICE1Q9Y2F5 2266 aa9.72□□□□□ -0.85
VEGFA-215ENST00000497139 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.85
VEGFA-215ENST00000497139 I3L3M4 83 aa9.71□□□□□ -0.85
VEGFA-215ENST00000497139 RNASE4P34096 147 aaKnown RBP9.71□□□□□ -0.85
VEGFA-215ENST00000497139 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.85
VEGFA-215ENST00000497139 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.85
VEGFA-215ENST00000497139 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.86
VEGFA-215ENST00000497139 ATOX1O00244 68 aa9.71□□□□□ -0.86
VEGFA-215ENST00000497139 TIMM17BO60830 172 aa9.71□□□□□ -0.86
VEGFA-215ENST00000497139 CEMP1Q6PRD7 247 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-215ENST00000497139 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
VEGFA-215ENST00000497139 CEP250Q9BV73 2442 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 GVINP1Q7Z2Y8 2422 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
VEGFA-215ENST00000497139 DEFB124Q8NES8 71 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 ZNF292O60281 2723 aa9.7□□□□□ -0.86
VEGFA-215ENST00000497139 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 IGHV7-81A0A0B4J1V7 117 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 M0R1W7 72 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 DAND5Q8N907 189 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 UBTD1Q9HAC8 227 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 PRSS2P07478 247 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
VEGFA-215ENST00000497139 IGF1P05019 195 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 TMEM258P61165 79 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
VEGFA-215ENST00000497139 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms