RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 COX8CQ7Z4L0 72 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 ST20Q9HBF5 79 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 ZNF324O75467 553 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-212ENST00000496462 P0DMU3 169 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 FAM231AP0DMU4 169 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 FAM231CP0DMU5 169 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 CARHSP1Q9Y2V2 147 aaKnown RBP6.24□□□□□ -1.41
U2AF1-212ENST00000496462 A0A087WX48 190 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 TMEM262E9PQX1 116 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 NANOS2P60321 138 aaKnown RBP6.24□□□□□ -1.41
U2AF1-212ENST00000496462 LINC00322Q6ZN03 302 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-212ENST00000496462 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 C14orf178Q8N769 122 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-212ENST00000496462 PTH2Q96A98 100 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 MAP1LC3AQ9H492 121 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 MDFICQ9P1T7 246 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 IGLV2-11P01706 119 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 ZFAND6Q6FIF0 208 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 Q6ZTI0 123 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
U2AF1-212ENST00000496462 A6NJY4 79 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 CRXO43186 299 aaPredicted RBP6.23□□□□□ -1.41
U2AF1-212ENST00000496462 NTF3P20783 257 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 RNASE8Q8TDE3 154 aaKnown RBP6.23□□□□□ -1.41
U2AF1-212ENST00000496462 RMI2Q96E14 147 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 IGHV3-73A0A0B4J1V6 119 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 APCSP02743 223 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 GZMBP10144 247 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
U2AF1-212ENST00000496462 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 X6R8D5 127 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 A0A087WWL8 130 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 MUC21A0A0G2JKD1 596 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 A0A0J9YY99 117 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 MUC21A0A140T8X8 626 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 K7EQD1 137 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 GYPEP15421 78 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 EVI2AP22794 236 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
U2AF1-212ENST00000496462 RASL10AQ92737 203 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 TRAPPC1Q9Y5R8 145 aa6.23□□□□□ -1.41
U2AF1-212ENST00000496462 LINC01549A6NIU2 74 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 PCP4L1A6NKN8 68 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 ZNF80P51504 273 aaPredicted RBP6.22□□□□□ -1.41
U2AF1-212ENST00000496462 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 DNLZQ5SXM8 178 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 GAGE1Q13065 139 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 GAGE4Q13068 117 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 GAGE5Q13069 117 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 GAGE13Q4V321 117 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 CHCHD5Q9BSY4 110 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 IGKV3D-20A0A0C4DH25 116 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 C19orf71A6NCJ1 209 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 EREGO14944 169 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 RS1O15537 224 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 CRPP02741 224 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 S100A6P06703 90 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 TTC32Q5I0X7 151 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
U2AF1-212ENST00000496462 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.41
U2AF1-212ENST00000496462 KIR3DS1Q14943 382 aa6.21□□□□□ -1.41
U2AF1-212ENST00000496462 Q8NAQ8 132 aa6.21□□□□□ -1.41
U2AF1-212ENST00000496462 LAMTOR2Q9Y2Q5 125 aa6.21□□□□□ -1.41
U2AF1-212ENST00000496462 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
U2AF1-212ENST00000496462 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 C9orf85Q96MD7 179 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 TMEM191AQ9H0A3 160 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 TRAV26-1A0A087WT03 109 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 PRR9Q5T870 116 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 DMRTA1Q5VZB9 504 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 NUP35Q8NFH5 326 aa6.21□□□□□ -1.42
U2AF1-212ENST00000496462 VCYO14598 125 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 SNAI2O43623 268 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 CTRLP40313 264 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 SRSF3P84103 164 aaKnown RBP6.2□□□□□ -1.42
U2AF1-212ENST00000496462 Q6ZN92 141 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 ZNRF2Q8NHG8 242 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 Q6ZTC4 211 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 CSNK1G2-AS1Q8NCQ2 148 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
U2AF1-212ENST00000496462 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 AMTP48728 403 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 RBMY1FQ15415 496 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms