RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SNHG12Q9BXW3 62 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 ICOSQ9Y6W8 199 aa6.38□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRBV7-9A0A0J9YWB2 115 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 RBFOX3A6NFN3 312 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 SOCS3O14543 225 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRGC2P03986 189 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 CRYGDP07320 174 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 SNRPCP09234 159 aaKnown RBP6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 CXCL1P09341 107 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 HRH1P35367 487 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 HSPE1P61604 102 aaKnown RBP6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 SPINK9Q5DT21 86 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 ZNF506Q5JVG8 444 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 LINC00612Q8N6U2 182 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 SLC35G3Q8N808 338 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 DTD1Q8TEA8 209 aa6.37□□□□□ -1.39
SMARCAL1-213ENST00000496037 TGIF2-C20orf24A0A0A6YYL0 155 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 MPDU1O75352 247 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 SRP19P09132 144 aaKnown RBP6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 OR10J1P30954 320 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 LEPP41159 167 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 TAS2R46P59540 309 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 YPEL3P61236 119 aaPredicted RBP6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 RANP62826 216 aaKnown RBP6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 C1orf194Q5T5A4 169 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 GFI1BQ5VTD9 330 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 DPPA3Q6W0C5 159 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 OR5H2Q8NGV7 314 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 CIRBP-AS1Q8TBR5 109 aa6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 C14orf166Q9Y224 244 aaKnown RBP6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 RCL1Q9Y2P8 373 aaKnown RBP6.36□□□□□ -1.39
SMARCAL1-213ENST00000496037 LPAP08519 4548 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 IAH1Q2TAA2 248 aaPredicted RBP6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 LYPD5Q6UWN5 251 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 Q6ZRU5 148 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 LHFPL1Q86WI0 220 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 RBKSQ9H477 322 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 GSKIPQ9P0R6 139 aa6.35□□□□□ -1.39
SMARCAL1-213ENST00000496037 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 PGLYRP1O75594 196 aaPredicted RBP6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 TOMM40O96008 361 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 RNASE2P10153 161 aaKnown RBP6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 SUPT4H1P63272 117 aaKnown RBP6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 ZNF266Q14584 549 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 TMEM241Q24JQ0 296 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 OR51G1Q8NGK1 321 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 BTF3L4Q96K17 158 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 RTBDNQ9BSG5 229 aaPredicted RBP6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 SLC25A39Q9BZJ4 359 aaPredicted RBP6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
SMARCAL1-213ENST00000496037 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 H7BYZ3 331 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 GAGE5Q13069 117 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 GAGE6Q13070 117 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 C20orf144Q9BQM9 153 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 PYGO2Q9BRQ0 406 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 LSM5Q9Y4Y9 91 aaKnown RBP6.33□□□□□ -1.4
SMARCAL1-213ENST00000496037 FAM231BA6NCW3 169 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 INS-IGF2F8WCM5 200 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 PITX3O75364 302 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 RND3P61587 244 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 RHOBP62745 196 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 COL5A1-AS1Q5SY13 56 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 NEGR1Q7Z3B1 354 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 OR8I2Q8N0Y5 310 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 WFDC1Q9HC57 220 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
SMARCAL1-213ENST00000496037 PSG1P11464 419 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 TAL2Q16559 108 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 BSXQ3C1V8 233 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 TDRG1Q3Y452 100 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 Q6ZTI0 123 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 IMMP2LQ96T52 175 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 ZFP30Q9Y2G7 519 aa6.31□□□□□ -1.4
SMARCAL1-213ENST00000496037 IGLV9-49A0A0B4J1Y8 123 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 CRYM-AS1A6NIL9 109 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 ORM1P02763 201 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 S100GP29377 79 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 GALR1P47211 349 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 SELENOTP62341 195 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 SRPXP78539 464 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 HIST1H1AQ02539 215 aaPredicted RBP6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 FOXI1Q12951 378 aa6.3□□□□□ -1.4
SMARCAL1-213ENST00000496037 SMIM15Q7Z3B0 74 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms