RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PRNTQ86SH4 94 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 ARL6IP6Q8N6S5 226 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 OR8A1Q8NGG7 326 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 RASL10AQ92737 203 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 LINC00477Q96M19 166 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 PYGO2Q9BRQ0 406 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 NDUFAF3Q9BU61 184 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 PSG8Q9UQ74 426 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 ARL2-SNX15V9GYD0 113 aa4.49□□□□□ -1.69
VIM-207ENST00000495528 LRP1BQ9NZR2 4599 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 H3BMM0 161 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 CT45A10P0DMU9 189 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 AKR1C3P42330 323 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 CNN1P51911 297 aaKnown RBP4.48□□□□□ -1.69
VIM-207ENST00000495528 ZNF138P52744 262 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 DSCR10P59022 87 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 UBE2G1P62253 170 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 FLI1Q01543 452 aaPredicted RBP4.48□□□□□ -1.69
VIM-207ENST00000495528 TMEM78Q5T7P6 136 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 Q6ZR54 194 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 CYB561D1Q8N8Q1 229 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 MRPL53Q96EL3 112 aaKnown RBP4.48□□□□□ -1.69
VIM-207ENST00000495528 DERL1Q9BUN8 251 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 SLC35B3Q9H1N7 401 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 SAV1Q9H4B6 383 aaPredicted RBP4.48□□□□□ -1.69
VIM-207ENST00000495528 SMDT1Q9H4I9 107 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 RPS10P5Q9NQ39 176 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 KLF12Q9Y4X4 402 aa4.48□□□□□ -1.69
VIM-207ENST00000495528 A4D1N5 150 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 RBAKDNA6NC62 111 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 ZNF727A8MUV8 499 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 TMEM250H0YL14 139 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 S100A9P06702 114 aaKnown RBP4.47□□□□□ -1.69
VIM-207ENST00000495528 RNASE4P34096 147 aaKnown RBP4.47□□□□□ -1.69
VIM-207ENST00000495528 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
VIM-207ENST00000495528 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
VIM-207ENST00000495528 NDUFA5Q16718 116 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 TMEM241Q24JQ0 296 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 SOHLH1Q5JUK2 328 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 BAGE2Q86Y30 109 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 Q8TAT8 98 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 TVP23CQ96ET8 276 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 ZNF492Q9P255 531 aa4.47□□□□□ -1.69
VIM-207ENST00000495528 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SERTM2A0A1B0GWG4 89 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 F8W036 122 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 M0R2Z0 102 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 GPX1P07203 203 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SFTA3P0C7M3 94 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SPART-AS1P0CW21 52 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 HLA-DRB4P13762 266 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 EMP1P54849 157 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 TAS2R60P59551 318 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SPINK13Q1W4C9 94 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SAPCD1Q5SSQ6 148 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 UBE2DNLQ8IWF7 75 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 EIF4E3Q8N5X7 224 aaKnown RBP4.46□□□□□ -1.7
VIM-207ENST00000495528 TMEM75Q8N9X5 138 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 TCEAL7Q9BRU2 100 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 XCL2Q9UBD3 114 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 HLA-DRB4X5D2U9 266 aa4.46□□□□□ -1.7
VIM-207ENST00000495528 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 TRAV12-3A0A0B4J271 114 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 TRBV6-1A0A0K0K1D8 114 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 FBLL1A6NHQ2 334 aaKnown RBP4.45□□□□□ -1.7
VIM-207ENST00000495528 NDUFS6O75380 124 aaKnown RBP4.45□□□□□ -1.7
VIM-207ENST00000495528 LTAP01374 205 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 MGST1P10620 155 aaKnown RBP4.45□□□□□ -1.7
VIM-207ENST00000495528 LEPP41159 167 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 GNG4P50150 75 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 OR5I1Q13606 314 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 FAM74A3Q4VXF1 159 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 CENPWQ5EE01 88 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 C1orf134Q5TEV5 83 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 AMTNQ6UX39 209 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 ZNF705AQ6ZN79 300 aaPredicted RBP4.45□□□□□ -1.7
VIM-207ENST00000495528 NDFIP1Q9BT67 221 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 ZFP30Q9Y2G7 519 aa4.45□□□□□ -1.7
VIM-207ENST00000495528 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 IGHV3OR16-12A0A075B7B8 117 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 C16orf90A8MZG2 172 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 GCGP01275 180 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 IGLV2-8P01709 118 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 HTN3P15516 51 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 TSPOP30536 169 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 CRIP1P50238 77 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 ZNF80P51504 273 aaPredicted RBP4.44□□□□□ -1.7
VIM-207ENST00000495528 NUTF2P61970 127 aaKnown RBP4.44□□□□□ -1.7
VIM-207ENST00000495528 RNF212Q495C1 297 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms