RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RPL19P84098 196 aaKnown RBP6.03□□□□□ -1.44
ITGB1-217ENST00000494395 CENPWQ5EE01 88 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 SMIM12Q96EX1 92 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 PARLQ9H300 379 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 JPT2Q9H910 190 aa6.03□□□□□ -1.44
ITGB1-217ENST00000494395 MRPS16Q9Y3D3 137 aaKnown RBP6.03□□□□□ -1.44
ITGB1-217ENST00000494395 LOC100131303A0A0U1RQF7 123 aa6.02□□□□□ -1.45
ITGB1-217ENST00000494395 K7EQD1 137 aa6.02□□□□□ -1.45
ITGB1-217ENST00000494395 RTL8CO15255 209 aa6.02□□□□□ -1.45
ITGB1-217ENST00000494395 SNAI2O43623 268 aa6.02□□□□□ -1.45
ITGB1-217ENST00000494395 NXPH4O95158 308 aa6.02□□□□□ -1.45
ITGB1-217ENST00000494395 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
ITGB1-217ENST00000494395 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
ITGB1-217ENST00000494395 TMSB15BA0A087X1C1 80 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 TRBV6-4A0A1B0GX49 114 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 RBFOX3A6NFN3 312 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 A8MWV9 139 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 TMEM250H0YL14 139 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 M0R2N4 97 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 NDUFS6O75380 124 aaKnown RBP6.01□□□□□ -1.45
ITGB1-217ENST00000494395 PRR27Q6MZM9 219 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 ZFP2Q6ZN57 461 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 NEGR1Q7Z3B1 354 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 SLC25A29Q8N8R3 303 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 SAMD10Q9BYL1 202 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 KRTAP1-5Q9BYS1 174 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 MED9Q9NWA0 146 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
ITGB1-217ENST00000494395 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 K7EN84 100 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 CRYGDP07320 174 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 OR5AL1P0C617 328 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 IGLC6P0CF74 106 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 LINC00694P0DN24 101 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
ITGB1-217ENST00000494395 GNG4P50150 75 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 TEX261Q6UWH6 196 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 SFRP2Q96HF1 295 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 FAM210AQ96ND0 272 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 Q9H8V8 135 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 DNAH2Q9P225 4427 aa6□□□□□ -1.45
ITGB1-217ENST00000494395 DNAH17Q9UFH2 4485 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 IGHV3-73A0A0B4J1V6 119 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 SRIP30626 198 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 TIRAPP58753 221 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 RHOHQ15669 191 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 ZFP82Q8N141 532 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 OR10AG1Q8NH19 301 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 Q9UF83 564 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
ITGB1-217ENST00000494395 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 M0R381 172 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 RHODO00212 210 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 SH2D6Q7Z4S9 175 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 C14orf178Q8N769 122 aaPredicted RBP5.98□□□□□ -1.45
ITGB1-217ENST00000494395 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 PCNPQ8WW12 178 aaKnown RBP5.98□□□□□ -1.45
ITGB1-217ENST00000494395 PRADC1Q9BSG0 188 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
ITGB1-217ENST00000494395 A0A1W2PPQ1 181 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 SIVA1O15304 175 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 SRP19P09132 144 aaKnown RBP5.97□□□□□ -1.45
ITGB1-217ENST00000494395 GZMBP10144 247 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
ITGB1-217ENST00000494395 TTC32Q5I0X7 151 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 C1orf134Q5TEV5 83 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 OR2D3Q8NGH3 330 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 BIN3Q9NQY0 253 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 LY96Q9Y6Y9 160 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 KIF25-AS1Q9Y6Z4 181 aa5.97□□□□□ -1.45
ITGB1-217ENST00000494395 MUC21A0A0G2JKD1 596 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 MUC21A0A140T8X8 626 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 P01737 135 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 LINC00315P59091 139 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 FAM74A4Q5TZK3 123 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 C6orf223Q8N319 242 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 FER1L6-AS1Q8NA97 138 aa5.96□□□□□ -1.46
ITGB1-217ENST00000494395 DAZAP1Q96EP5 407 aaKnown RBP5.96□□□□□ -1.46
ITGB1-217ENST00000494395 EIF5A2Q9GZV4 153 aaKnown RBP5.96□□□□□ -1.46
ITGB1-217ENST00000494395 C9JQL5 133 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 DNAH10OSP0CZ25 163 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 CTRLP40313 264 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 Q6ZRN7 208 aaPredicted RBP5.95□□□□□ -1.46
ITGB1-217ENST00000494395 FAM231DQ6ZW35 169 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 ATP6V0E2Q8NHE4 81 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 SMIM7Q9BQ49 75 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 CNFNQ9BYD5 112 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 RNASE7Q9H1E1 156 aaKnown RBP5.95□□□□□ -1.46
ITGB1-217ENST00000494395 RPP21Q9H633 154 aaKnown RBP5.95□□□□□ -1.46
ITGB1-217ENST00000494395 MSRB1Q9NZV6 116 aa5.95□□□□□ -1.46
ITGB1-217ENST00000494395 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 TRBV10-1A0A0K0K1A3 114 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 XKRY2A2RUG3 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms