RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.65
PTPRU-208ENST00000493601 TCEAL7Q9BRU2 100 aa11.02□□□□□ -0.65
PTPRU-208ENST00000493601 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
PTPRU-208ENST00000493601 FLG2Q5D862 2391 aaPredicted RBP11.01□□□□□ -0.65
PTPRU-208ENST00000493601 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 CRIP1P50238 77 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 WFDC2Q14508 124 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 RMI2Q96E14 147 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 FAM30AQ9NZY2 134 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 Q9UF83 564 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
PTPRU-208ENST00000493601 LECT2O14960 151 aa11□□□□□ -0.65
PTPRU-208ENST00000493601 TPT1P13693 172 aaKnown RBP11□□□□□ -0.65
PTPRU-208ENST00000493601 SFRP2Q96HF1 295 aa11□□□□□ -0.65
PTPRU-208ENST00000493601 TRBV6-1A0A0K0K1D8 114 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 GRIFINA4D1Z8 144 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 M0R381 172 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 LTAP01374 205 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 FHITP49789 147 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 ZNF674Q2M3X9 581 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 Q6ZSA8 131 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 ZFP82Q8N141 532 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
PTPRU-208ENST00000493601 A0A087WWL8 130 aa10.98□□□□□ -0.65
PTPRU-208ENST00000493601 CST9LP1Q5W188 147 aa10.98□□□□□ -0.65
PTPRU-208ENST00000493601 NIT1Q86X76 327 aa10.98□□□□□ -0.65
PTPRU-208ENST00000493601 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.97□□□□□ -0.65
PTPRU-208ENST00000493601 TMSB15BA0A087X1C1 80 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 TRBV10-1A0A0K0K1A3 114 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 ARPC5O15511 151 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
PTPRU-208ENST00000493601 AKR1C3P42330 323 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 KCNIP4Q6PIL6 250 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
PTPRU-208ENST00000493601 A0A087WX48 190 aa10.96□□□□□ -0.65
PTPRU-208ENST00000493601 G3V3Q6 166 aa10.96□□□□□ -0.65
PTPRU-208ENST00000493601 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
PTPRU-208ENST00000493601 ELOBQ15370 118 aa10.96□□□□□ -0.65
PTPRU-208ENST00000493601 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
PTPRU-208ENST00000493601 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
PTPRU-208ENST00000493601 IGKV2D-24A0A075B6R9 120 aa10.95□□□□□ -0.66
PTPRU-208ENST00000493601 Q8N976 141 aa10.95□□□□□ -0.66
PTPRU-208ENST00000493601 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
PTPRU-208ENST00000493601 KLK12Q9UKR0 248 aa10.95□□□□□ -0.66
PTPRU-208ENST00000493601 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
PTPRU-208ENST00000493601 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
PTPRU-208ENST00000493601 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
PTPRU-208ENST00000493601 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
PTPRU-208ENST00000493601 UBE2D3P61077 147 aa10.93□□□□□ -0.66
PTPRU-208ENST00000493601 UBE2D2P62837 147 aa10.93□□□□□ -0.66
PTPRU-208ENST00000493601 Q0VG73 95 aa10.93□□□□□ -0.66
PTPRU-208ENST00000493601 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
PTPRU-208ENST00000493601 PAGE4O60829 102 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 RAB4BP61018 213 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 RGS21Q2M5E4 152 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 ATRAIDQ6UW56 229 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 OR10G8Q8NGN5 311 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 DNAJC30Q96LL9 226 aa10.92□□□□□ -0.66
PTPRU-208ENST00000493601 J3QL48 77 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 PFDN1O60925 122 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 CXCL1P09341 107 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 ZNF345Q14585 488 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 ZNF56Q15929 161 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 DNAH8Q96JB1 4490 aa10.91□□□□□ -0.66
PTPRU-208ENST00000493601 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 UMAD1C9J7I0 102 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.9□□□□□ -0.66
PTPRU-208ENST00000493601 OR10AG1Q8NH19 301 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 SFT2D1Q8WV19 159 aa10.9□□□□□ -0.66
PTPRU-208ENST00000493601 ZNF471Q9BX82 626 aaPredicted RBP10.9□□□□□ -0.66
PTPRU-208ENST00000493601 SCO2A0A1W2PP80 73 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 CRPP02741 224 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 KCNRGQ8N5I3 272 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 C1orf43Q9BWL3 253 aa10.89□□□□□ -0.67
PTPRU-208ENST00000493601 PKIAP61925 76 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 RPL19P84098 196 aaKnown RBP10.88□□□□□ -0.67
PTPRU-208ENST00000493601 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 BAGE2Q86Y30 109 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 NEXN-AS1Q8NBZ9 246 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 CHAC1Q9BUX1 264 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 MLST8Q9BVC4 326 aa10.88□□□□□ -0.67
PTPRU-208ENST00000493601 A0A1B0GV50 99 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 SNAI2O43623 268 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 SPANXN1Q5VSR9 72 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 C15orf54Q8N8G6 183 aa10.87□□□□□ -0.67
PTPRU-208ENST00000493601 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
PTPRU-208ENST00000493601 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
PTPRU-208ENST00000493601 F5H697 171 aa10.85□□□□□ -0.67
PTPRU-208ENST00000493601 ANGP03950 147 aaKnown RBP10.85□□□□□ -0.67
PTPRU-208ENST00000493601 TMEM97Q5BJF2 176 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms