RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 RBMY1EA6NEQ0 496 aaKnown RBP15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 RBMY1DP0C7P1 496 aaKnown RBP15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 FHL3Q13643 280 aa15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 ORMDL2Q53FV1 153 aa15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 ZMAT4Q9H898 229 aa15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 MAP6D1Q9H9H5 199 aa15.57■□□□□ 0.08
CCDC88B-208ENST00000492980 A0A1W2PRX2 142 aa15.56■□□□□ 0.08
CCDC88B-208ENST00000492980 K7EMI3 77 aa15.56■□□□□ 0.08
CCDC88B-208ENST00000492980 SUMO4Q6EEV6 95 aa15.56■□□□□ 0.08
CCDC88B-208ENST00000492980 CD300EQ496F6 205 aaPredicted RBP15.56■□□□□ 0.08
CCDC88B-208ENST00000492980 SYT8Q8NBV8 401 aa15.56■□□□□ 0.08
CCDC88B-208ENST00000492980 UNC79Q9P2D8 2635 aa15.55■□□□□ 0.08
CCDC88B-208ENST00000492980 C16orf95Q9H693 158 aa15.55■□□□□ 0.08
CCDC88B-208ENST00000492980 CUBNO60494 3623 aa15.55■□□□□ 0.08
CCDC88B-208ENST00000492980 TRGV11A0A075B6L2 103 aa15.55■□□□□ 0.08
CCDC88B-208ENST00000492980 LINC01006Q8NI28 216 aa15.55■□□□□ 0.08
CCDC88B-208ENST00000492980 FGF6P10767 208 aa15.54■□□□□ 0.08
CCDC88B-208ENST00000492980 CSTL1Q9H114 145 aa15.54■□□□□ 0.08
CCDC88B-208ENST00000492980 CCL24O00175 119 aa15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 ACANP16112 2415 aa15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 RPL32P62910 135 aaKnown RBP15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 TOMM6Q96B49 74 aa15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 SPAG8Q99932 426 aaPredicted RBP15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 CITED2Q99967 270 aaPredicted RBP15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 ZNF256Q9Y2P7 627 aaPredicted RBP15.53■□□□□ 0.08
CCDC88B-208ENST00000492980 CBY3A6NI87 242 aa15.52■□□□□ 0.08
CCDC88B-208ENST00000492980 F5H697 171 aa15.52■□□□□ 0.07
CCDC88B-208ENST00000492980 TCTAP57738 103 aa15.52■□□□□ 0.07
CCDC88B-208ENST00000492980 SCGB2A2Q13296 93 aa15.52■□□□□ 0.07
CCDC88B-208ENST00000492980 FAM74A4Q5TZK3 123 aa15.52■□□□□ 0.07
CCDC88B-208ENST00000492980 C2orf91Q6ZV80 131 aa15.52■□□□□ 0.07
CCDC88B-208ENST00000492980 IGKCP01834 107 aa15.51■□□□□ 0.07
CCDC88B-208ENST00000492980 CRYGDP07320 174 aa15.51■□□□□ 0.07
CCDC88B-208ENST00000492980 MPV17L2Q567V2 206 aa15.51■□□□□ 0.07
CCDC88B-208ENST00000492980 HHLA3Q9XRX5 114 aa15.51■□□□□ 0.07
CCDC88B-208ENST00000492980 TSSC4Q9Y5U2 329 aaPredicted RBP15.51■□□□□ 0.07
CCDC88B-208ENST00000492980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 NEGR1Q7Z3B1 354 aa15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 TRAV25A0A0B4J276 109 aa15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 DPM2O94777 84 aa15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 POLR2KP53803 58 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 BOD1L2Q8IYS8 172 aa15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 NF1P21359 2839 aa15.5■□□□□ 0.07
CCDC88B-208ENST00000492980 ZNF876PQ49A33 203 aa15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 SCGB3A1Q96QR1 104 aa15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 A0A087WX48 190 aa15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 C2orf66Q6UXQ4 117 aa15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 ZNF418Q8TF45 676 aaPredicted RBP15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 MRPL35Q9NZE8 188 aaKnown RBP15.49■□□□□ 0.07
CCDC88B-208ENST00000492980 HILS1P60008 231 aa15.48■□□□□ 0.07
CCDC88B-208ENST00000492980 TMEM160Q9NX00 188 aa15.48■□□□□ 0.07
CCDC88B-208ENST00000492980 TRBV6-5A0A0K0K1A5 114 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 ZNF25P17030 456 aaPredicted RBP15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 ZNF56Q15929 161 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 ODF3L2Q3SX64 289 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 BVES-AS1Q5T3Y7 98 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 TRAV12-1A0A0B4J245 112 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 M0QY20 66 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 HTN1P15515 57 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 G0S2P27469 103 aa15.47■□□□□ 0.07
CCDC88B-208ENST00000492980 DLEU1O43261 78 aa15.46■□□□□ 0.07
CCDC88B-208ENST00000492980 NMUP48645 174 aa15.46■□□□□ 0.07
CCDC88B-208ENST00000492980 MORN3Q6PF18 240 aaPredicted RBP15.46■□□□□ 0.07
CCDC88B-208ENST00000492980 C12orf54Q6X4T0 127 aa15.46■□□□□ 0.07
CCDC88B-208ENST00000492980 SMR3AQ99954 134 aa15.46■□□□□ 0.07
CCDC88B-208ENST00000492980 SDHAF1A6NFY7 115 aa15.46■□□□□ 0.06
CCDC88B-208ENST00000492980 VCYO14598 125 aa15.46■□□□□ 0.06
CCDC88B-208ENST00000492980 PCP2Q8IVA1 136 aa15.46■□□□□ 0.06
CCDC88B-208ENST00000492980 IGKV2D-26A0A0A0MRZ7 120 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 PRM2P04554 102 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 CLUHP3Q96NS8 147 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 TMEM208Q9BTX3 173 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 TRBV27A0A0K0K1C4 114 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 ZC2HC1BQ5TFG8 222 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 ZFP2Q6ZN57 461 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 NEXN-AS1Q8NBZ9 246 aa15.44■□□□□ 0.06
CCDC88B-208ENST00000492980 ERASQ7Z444 233 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 FASNP49327 2511 aaKnown RBP15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 H7C1H1 209 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 TRPT1Q86TN4 253 aaKnown RBP15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 GTSCR1Q86UQ5 136 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 BAALCQ8WXS3 180 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 KIR2DL4Q99706 377 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 LINC00467Q9BRT7 94 aa15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 GCN1Q92616 2671 aaKnown RBP15.43■□□□□ 0.06
CCDC88B-208ENST00000492980 F8VRH5 84 aa15.42■□□□□ 0.06
CCDC88B-208ENST00000492980 INSP01308 110 aa15.42■□□□□ 0.06
CCDC88B-208ENST00000492980 PLNP26678 52 aa15.42■□□□□ 0.06
CCDC88B-208ENST00000492980 CYSLTR1Q9Y271 337 aa15.42■□□□□ 0.06
CCDC88B-208ENST00000492980 MTORP42345 2549 aa15.42■□□□□ 0.06
CCDC88B-208ENST00000492980 SIVA1O15304 175 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 NDUFA7O95182 113 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 ZNF415Q09FC8 603 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 DEFB104AQ8WTQ1 72 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 JMJD8Q96S16 334 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 LINC01587Q99440 93 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 TP53TG1Q9Y2A0 90 aa15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 CHTOPQ9Y3Y2 248 aaKnown RBP15.41■□□□□ 0.06
CCDC88B-208ENST00000492980 M0R2P5 195 aa15.4■□□□□ 0.06
CCDC88B-208ENST00000492980 RIPPLY3P57055 190 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms