RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 HBDP02042 147 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
PTPN7-216ENST00000492977 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 RBMY1FQ15415 496 aaKnown RBP10.31□□□□□ -0.76
PTPN7-216ENST00000492977 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 C20orf78Q9BR46 151 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 ZNF747Q9BV97 191 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 C20orf202A1L168 122 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 MGPP08493 103 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 LINC00315P59091 139 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
PTPN7-216ENST00000492977 INSP01308 110 aa10.3□□□□□ -0.76
PTPN7-216ENST00000492977 DDTP30046 118 aa10.3□□□□□ -0.76
PTPN7-216ENST00000492977 FCER1GP30273 86 aa10.3□□□□□ -0.76
PTPN7-216ENST00000492977 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
PTPN7-216ENST00000492977 TRPT1Q86TN4 253 aaKnown RBP10.3□□□□□ -0.76
PTPN7-216ENST00000492977 RASL10AQ92737 203 aa10.3□□□□□ -0.76
PTPN7-216ENST00000492977 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
PTPN7-216ENST00000492977 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
PTPN7-216ENST00000492977 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
PTPN7-216ENST00000492977 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
PTPN7-216ENST00000492977 LINC00482Q8N8I6 264 aa10.28□□□□□ -0.76
PTPN7-216ENST00000492977 SMIM2Q9BVW6 85 aa10.28□□□□□ -0.76
PTPN7-216ENST00000492977 JPT2Q9H910 190 aa10.28□□□□□ -0.76
PTPN7-216ENST00000492977 PAM16Q9Y3D7 125 aa10.28□□□□□ -0.76
PTPN7-216ENST00000492977 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
PTPN7-216ENST00000492977 SETXQ7Z333 2677 aaKnown RBP10.28□□□□□ -0.76
PTPN7-216ENST00000492977 K7EMI3 77 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 LAGE3Q14657 143 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 ZNF876PQ49A33 203 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 PIK3CD-AS1Q5SR53 167 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 PTH2Q96A98 100 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 LINC01587Q99440 93 aa10.27□□□□□ -0.76
PTPN7-216ENST00000492977 NSD1Q96L73 2696 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-216ENST00000492977 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 A0A087WWL8 130 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 CRYGDP07320 174 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 HTN1P15515 57 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 ZNF415Q09FC8 603 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 HIVEP1P15822 2718 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 FAM229AH3BQW9 127 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
PTPN7-216ENST00000492977 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
PTPN7-216ENST00000492977 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
PTPN7-216ENST00000492977 F5H697 171 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 M0R2P5 195 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 DEFA6Q01524 100 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 SPATA45Q537H7 98 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 ORMDL2Q53FV1 153 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
PTPN7-216ENST00000492977 ATOH7Q8N100 152 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 SPXQ9BT56 116 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 C19orf73Q9NVV2 129 aa10.25□□□□□ -0.77
PTPN7-216ENST00000492977 C2CD3Q4AC94 2353 aa10.24□□□□□ -0.77
PTPN7-216ENST00000492977 INSL3P51460 131 aa10.24□□□□□ -0.77
PTPN7-216ENST00000492977 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.24□□□□□ -0.77
PTPN7-216ENST00000492977 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
PTPN7-216ENST00000492977 TCAPO15273 167 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 FAM74A4Q5TZK3 123 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 CITED1Q99966 193 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
PTPN7-216ENST00000492977 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 H0Y8G0 127 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 LGALS9BQ3B8N2 356 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 LGALS9CQ6DKI2 356 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 A8MWV9 139 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 M0QY20 66 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 ATP5LO75964 103 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 NUDT3O95989 172 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
PTPN7-216ENST00000492977 ZNF56Q15929 161 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
PTPN7-216ENST00000492977 VCYO14598 125 aa10.21□□□□□ -0.78
PTPN7-216ENST00000492977 PRM2P04554 102 aa10.21□□□□□ -0.78
PTPN7-216ENST00000492977 C9orf66Q5T8R8 295 aa10.21□□□□□ -0.78
PTPN7-216ENST00000492977 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.78
PTPN7-216ENST00000492977 C1QTNF4Q9BXJ3 329 aa10.21□□□□□ -0.78
PTPN7-216ENST00000492977 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.78
PTPN7-216ENST00000492977 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 HSBP1L1C9JCN9 74 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 G0S2P27469 103 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 C14orf144Q96I85 54 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
PTPN7-216ENST00000492977 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
PTPN7-216ENST00000492977 H7C1H1 209 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
PTPN7-216ENST00000492977 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 IGLL1P15814 213 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms