RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 C20orf78Q9BR46 151 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 SMIM2Q9BVW6 85 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 MAP1LC3CQ9BXW4 147 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 WFDC10AQ9H1F0 79 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 JPT2Q9H910 190 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 IGLV2-18A0A075B6J9 118 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 M0R2P5 195 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 RPL35AP18077 110 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 SUMO2P61956 95 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 ZNF56Q15929 161 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 ZNF876PQ49A33 203 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 PIK3CD-AS1Q5SR53 167 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 FAM74A4Q5TZK3 123 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 MORN3Q6PF18 240 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 C1orf158Q8N1D5 194 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 PTH2Q96A98 100 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 RPL39LQ96EH5 51 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 VAMP8Q9BV40 100 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 PRO1933Q9H354 126 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 GOLT1BQ9Y3E0 138 aa6.67□□□□□ -1.34
SMARCC1-208ENST00000492896 KIR2DL5BA0A0G2JN68 375 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 KIR2DL5BA0A0G2JPC4 375 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 A8MWV9 139 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 F5H697 171 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 FCER1GP30273 86 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 GTSCR1Q86UQ5 136 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 KIR2DL5AQ8N109 375 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 C11orf72Q8NBR9 251 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 SPXQ9BT56 116 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 MCRIP2Q9BUT9 160 aaKnown RBP6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 ZNF747Q9BV97 191 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 C1QTNF4Q9BXJ3 329 aa6.66□□□□□ -1.34
SMARCC1-208ENST00000492896 IGHV3OR16-12A0A075B7B8 117 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 K7EMI3 77 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 CRYGDP07320 174 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 LAGE3Q14657 143 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 SPATA3Q8NHX4 192 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 TMEM158Q8WZ71 300 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
SMARCC1-208ENST00000492896 H0Y8G0 127 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 RHODO00212 210 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 TCAPO15273 167 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 PRM2P04554 102 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 KRTAP24-1Q3LI83 254 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 ORMDL2Q53FV1 153 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 NDUFAF3Q9BU61 184 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 CSTL1Q9H114 145 aa6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 MRPL16Q9NX20 251 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-208ENST00000492896 TRBV6-5A0A0K0K1A5 114 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 CYSRT1A8MQ03 144 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 LINC00587B1AMM8 73 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 H7C1H1 209 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 M0QY20 66 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 NUDT3O95989 172 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 AZU1P20160 251 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 SPATA45Q537H7 98 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 LINC01545Q5VT33 79 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 RNASE8Q8TDE3 154 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
SMARCC1-208ENST00000492896 TRAV9-2A0A087WT02 112 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 RS1O15537 224 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 ATP5LO75964 103 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 DDTP30046 118 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 LGALS9BQ3B8N2 356 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 LGALS9CQ6DKI2 356 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 ZNF705AQ6ZN79 300 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 WFDC9Q8NEX5 89 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 C16orf74Q96GX8 76 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 C18orf15Q96N68 181 aa6.62□□□□□ -1.35
SMARCC1-208ENST00000492896 BAHCC1Q9P281 2608 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 TRGV1A0A0A0MS02 117 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 VCYO14598 125 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 G0S2P27469 103 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 CFAP126Q5VTH2 177 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 UFSP1Q6NVU6 142 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 KIR2DL4Q99706 377 aa6.61□□□□□ -1.35
SMARCC1-208ENST00000492896 TRBV27A0A0K0K1C4 114 aa6.6□□□□□ -1.35
SMARCC1-208ENST00000492896 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
SMARCC1-208ENST00000492896 WIPF1O43516 503 aa6.6□□□□□ -1.35
SMARCC1-208ENST00000492896 IGLL1P15814 213 aa6.6□□□□□ -1.35
SMARCC1-208ENST00000492896 RRN3P1Q2M238 152 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms