RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 ZNF826PQ6ZT77 177 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 CTAGE3PQ8IX95 158 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 NUP35Q8NFH5 326 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 OR5J2Q8NH18 312 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 MAGOHBQ96A72 148 aaKnown RBP2.81□□□□□ -1.96
SND1-216ENST00000492840 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 ERGIC3Q9Y282 383 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 HILPDAQ9Y5L2 63 aa2.81□□□□□ -1.96
SND1-216ENST00000492840 C1orf196B1AJZ1 125 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 IFNA4P05014 189 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 RPL38P63173 70 aaKnown RBP2.8□□□□□ -1.96
SND1-216ENST00000492840 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 LHFPL1Q86WI0 220 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 Q8NDZ9 215 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 OR51T1Q8NGJ9 327 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 DNAJC9Q8WXX5 260 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 CACYBPQ9HB71 228 aaKnown RBP2.8□□□□□ -1.96
SND1-216ENST00000492840 HSPB11Q9Y547 144 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 FAT1Q14517 4588 aa2.8□□□□□ -1.96
SND1-216ENST00000492840 A0A1B0GWA3 101 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 G3V3Q6 166 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 H3BQF6 201 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 M0R2N4 97 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 CYB5BO43169 146 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 PFDN1O60925 122 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 APOA2P02652 100 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 RBP4P02753 201 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 CCL3L1P16619 93 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 GUCA1AP43080 201 aaPredicted RBP2.79□□□□□ -1.96
SND1-216ENST00000492840 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
SND1-216ENST00000492840 SURF2Q15527 256 aaPredicted RBP2.79□□□□□ -1.96
SND1-216ENST00000492840 TOMM20LQ6UXN7 152 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 CLVS1Q8IUQ0 354 aaPredicted RBP2.79□□□□□ -1.96
SND1-216ENST00000492840 MYOZ3Q8TDC0 251 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 SLAMF6Q96DU3 332 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 MRPL57Q9BQC6 102 aaKnown RBP2.79□□□□□ -1.96
SND1-216ENST00000492840 TMEM133Q9H2Q1 129 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 MUC2Q02817 5179 aa2.79□□□□□ -1.96
SND1-216ENST00000492840 TRAV7A0A075B6U4 112 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 HMGN4O00479 90 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 SLC22A1O15245 554 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 IGKV1-16P04430 117 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 PSMB8P28062 276 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 YPEL3P61236 119 aaPredicted RBP2.78□□□□□ -1.96
SND1-216ENST00000492840 SAMD13Q5VXD3 122 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 MIR17HGQ75NE6 70 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 TRAPPC6BQ86SZ2 158 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 C5orf56Q8N8D9 126 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 OR8D4Q8NGM9 314 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 DCANP1Q8TF63 244 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 SCGB3A1Q96QR1 104 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 CALML5Q9NZT1 146 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 TIMM9Q9Y5J7 89 aa2.78□□□□□ -1.96
SND1-216ENST00000492840 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 TAX1BP3O14907 124 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 P0DMU3 169 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 FAM231AP0DMU4 169 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 FAM231CP0DMU5 169 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 DEFA4P12838 97 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 SUPT4H1P63272 117 aaKnown RBP2.77□□□□□ -1.97
SND1-216ENST00000492840 S100A12P80511 92 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 C1orf134Q5TEV5 83 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 LYZL1Q6UWQ5 148 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 ZCCHC23Q6ZST2 131 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 CLECL1Q8IZS7 167 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 HIST3H2BBQ8N257 126 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 LYPD1Q8N2G4 141 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 OR4C16Q8NGL9 310 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 PFN4Q8NHR9 129 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 ADAT3Q96EY9 351 aaPredicted RBP2.77□□□□□ -1.97
SND1-216ENST00000492840 CCDC32Q9BV29 185 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 OSTCQ9NRP0 149 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 HHLA3Q9XRX5 114 aa2.77□□□□□ -1.97
SND1-216ENST00000492840 IGKV1-9A0A0C4DH69 117 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 OOSP1A8MZH6 123 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 H7C2G1 150 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 M0R378 163 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 PPBPP02775 128 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 TFF1P04155 84 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 CTSGP08311 255 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 EIF2B2P49770 351 aaKnown RBP2.76□□□□□ -1.97
SND1-216ENST00000492840 EMP1P54849 157 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 TCF24Q7RTU0 167 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 MBD3L1Q8WWY6 194 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 CKLFQ9UBR5 152 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 OR52A1Q9UKL2 312 aa2.76□□□□□ -1.97
SND1-216ENST00000492840 IGLV10-54A0A075B6I4 117 aa2.75□□□□□ -1.97
SND1-216ENST00000492840 IGKV1D-17A0A075B6S4 117 aa2.75□□□□□ -1.97
SND1-216ENST00000492840 ASAH2BP0C7U1 165 aa2.75□□□□□ -1.97
SND1-216ENST00000492840 PIPP12273 146 aaPredicted RBP2.75□□□□□ -1.97
SND1-216ENST00000492840 NFYAP23511 347 aaPredicted RBP2.75□□□□□ -1.97
SND1-216ENST00000492840 NFYBP25208 207 aa2.75□□□□□ -1.97
SND1-216ENST00000492840 EIF5AP63241 154 aaKnown RBP2.75□□□□□ -1.97
SND1-216ENST00000492840 HES1Q14469 280 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms