RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
PTPRE-210ENST00000492479 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
PTPRE-210ENST00000492479 TENM3Q9P273 2699 aa9.77□□□□□ -0.85
PTPRE-210ENST00000492479 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 FABP9Q0Z7S8 132 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 Q6ZTI0 123 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 AMN1Q8IY45 258 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-210ENST00000492479 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
PTPRE-210ENST00000492479 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 LAMTOR2Q9Y2Q5 125 aa9.76□□□□□ -0.85
PTPRE-210ENST00000492479 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
PTPRE-210ENST00000492479 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
PTPRE-210ENST00000492479 MRPL51Q4U2R6 128 aaKnown RBP9.75□□□□□ -0.85
PTPRE-210ENST00000492479 JPT2Q9H910 190 aa9.75□□□□□ -0.85
PTPRE-210ENST00000492479 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
PTPRE-210ENST00000492479 HUWE1Q7Z6Z7 4374 aaKnown RBP9.74□□□□□ -0.85
PTPRE-210ENST00000492479 SMIM17P0DL12 118 aa9.74□□□□□ -0.85
PTPRE-210ENST00000492479 DEFB121Q5J5C9 76 aa9.74□□□□□ -0.85
PTPRE-210ENST00000492479 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
PTPRE-210ENST00000492479 ALKBH7Q9BT30 221 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-210ENST00000492479 SAMD10Q9BYL1 202 aa9.74□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 SSTP61278 116 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-210ENST00000492479 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 RETNQ9HD89 108 aa9.73□□□□□ -0.85
PTPRE-210ENST00000492479 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 PPP1R17O96001 155 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 SPART-AS1P0CW21 52 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 RAB5BP61020 215 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
PTPRE-210ENST00000492479 PRKDCP78527 4128 aaKnown RBP9.71□□□□□ -0.85
PTPRE-210ENST00000492479 A0A087WWL8 130 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 D6R8Y8 96 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 Q0VG73 95 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 COA6Q5JTJ3 125 aaKnown RBP9.71□□□□□ -0.86
PTPRE-210ENST00000492479 NRACQ8N912 160 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 MEGF8Q7Z7M0 2845 aa9.71□□□□□ -0.86
PTPRE-210ENST00000492479 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 M0QY20 66 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 GAGE7O76087 117 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
PTPRE-210ENST00000492479 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 SRIP30626 198 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 CKS2P33552 79 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 EMP1P54849 157 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
PTPRE-210ENST00000492479 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 PRELID3AQ96N28 172 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
PTPRE-210ENST00000492479 H7C1H1 209 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 GATA1P15976 413 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-210ENST00000492479 FAM74A4Q5TZK3 123 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 ZNF479Q96JC4 524 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 C20orf78Q9BR46 151 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
PTPRE-210ENST00000492479 TRBV10-1A0A0K0K1A3 114 aa9.68□□□□□ -0.86
PTPRE-210ENST00000492479 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
PTPRE-210ENST00000492479 MGPP08493 103 aa9.68□□□□□ -0.86
PTPRE-210ENST00000492479 FHL2Q14192 279 aa9.68□□□□□ -0.86
PTPRE-210ENST00000492479 ZNF56Q15929 161 aa9.68□□□□□ -0.86
PTPRE-210ENST00000492479 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 DEFB4AO15263 64 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 NPYP01303 97 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 DAD1P61803 113 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 DEFA6Q01524 100 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 Q6ZSN1 163 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
PTPRE-210ENST00000492479 SMKR1H3BMG3 65 aa9.66□□□□□ -0.86
PTPRE-210ENST00000492479 NCR2O95944 276 aa9.66□□□□□ -0.86
PTPRE-210ENST00000492479 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
PTPRE-210ENST00000492479 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
PTPRE-210ENST00000492479 C12orf74Q32Q52 190 aa9.66□□□□□ -0.86
PTPRE-210ENST00000492479 NIT2Q9NQR4 276 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms