RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 MSMBP08118 114 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 RASL10AQ92737 203 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 HHLA3Q9XRX5 114 aa11.51□□□□□ -0.57
TNFRSF1B-203ENST00000492361 DEFB112Q30KQ8 113 aa11.5□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ZNF48Q96MX3 618 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1B-203ENST00000492361 OVOL1O14753 267 aa11.5□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ZFAND2AQ8N6M9 145 aa11.5□□□□□ -0.57
TNFRSF1B-203ENST00000492361 NRACQ8N912 160 aa11.5□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
TNFRSF1B-203ENST00000492361 A0A087WX48 190 aa11.49□□□□□ -0.57
TNFRSF1B-203ENST00000492361 RNF223E7ERA6 249 aa11.49□□□□□ -0.57
TNFRSF1B-203ENST00000492361 CDKN1BP46527 198 aa11.49□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
TNFRSF1B-203ENST00000492361 IGHV3-16A0A0C4DH30 117 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 C9orf47Q6ZRZ4 202 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 CEND1Q8N111 149 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 F8VRH5 84 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ZNF876PQ49A33 203 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 NDUFA4O00483 81 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
TNFRSF1B-203ENST00000492361 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PIFOQ8TCI5 191 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 SNRPD3P62318 126 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 C12orf74Q32Q52 190 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 P0DMU3 169 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 FAM231AP0DMU4 169 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 FAM231CP0DMU5 169 aa11.47□□□□□ -0.57
TNFRSF1B-203ENST00000492361 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PHLDA1Q8WV24 401 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1B-203ENST00000492361 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.58
TNFRSF1B-203ENST00000492361 RBAKDNA6NC62 111 aa11.46□□□□□ -0.58
TNFRSF1B-203ENST00000492361 CEMP1Q6PRD7 247 aaPredicted RBP11.46□□□□□ -0.58
TNFRSF1B-203ENST00000492361 PLNP26678 52 aa11.45□□□□□ -0.58
TNFRSF1B-203ENST00000492361 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
TNFRSF1B-203ENST00000492361 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1B-203ENST00000492361 GPHB5Q86YW7 130 aa11.45□□□□□ -0.58
TNFRSF1B-203ENST00000492361 DEFB131AP59861 70 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 MYMXA0A1B0GTQ4 84 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 HERVK_113P61574 105 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 SPXQ9BT56 116 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 MUC4Q99102 2169 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
TNFRSF1B-203ENST00000492361 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 C11orf86A6NJI1 115 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 RNASE3P12724 160 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 PROK1P58294 105 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 Q8N1Y9 231 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 B4DSR2 109 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 IGLL5B9A064 214 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 IGHV3-53P01767 116 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 PTH2Q96A98 100 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
TNFRSF1B-203ENST00000492361 C18orf65Q6ZTR6 163 aa11.42□□□□□ -0.58
TNFRSF1B-203ENST00000492361 TSSC4Q9Y5U2 329 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1B-203ENST00000492361 SLURP1P55000 103 aa11.42□□□□□ -0.58
TNFRSF1B-203ENST00000492361 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
TNFRSF1B-203ENST00000492361 DYNLRB2Q8TF09 96 aa11.41□□□□□ -0.58
TNFRSF1B-203ENST00000492361 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
TNFRSF1B-203ENST00000492361 IGHG2P01859 326 aa11.41□□□□□ -0.58
TNFRSF1B-203ENST00000492361 APRG1Q8IVJ8 170 aa11.41□□□□□ -0.58
TNFRSF1B-203ENST00000492361 OR5A1Q8NGJ0 315 aa11.41□□□□□ -0.58
TNFRSF1B-203ENST00000492361 IGLV2-18A0A075B6J9 118 aa11.4□□□□□ -0.58
TNFRSF1B-203ENST00000492361 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1B-203ENST00000492361 NBEAL2Q6ZNJ1 2754 aa11.4□□□□□ -0.59
TNFRSF1B-203ENST00000492361 INSL3P51460 131 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 DGAT2L7PQ6IED9 249 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 CNFNQ9BYD5 112 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 IGHV4OR15-8A0A075B7B6 117 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 A0A087WW49 117 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 LGALS1P09382 135 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 VCX2Q9H322 139 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 VCYO14598 125 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 SIVA1O15304 175 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 LINC01587Q99440 93 aa11.39□□□□□ -0.59
TNFRSF1B-203ENST00000492361 J3QR89 54 aa11.38□□□□□ -0.59
TNFRSF1B-203ENST00000492361 HECTD1Q9ULT8 2610 aa11.38□□□□□ -0.59
TNFRSF1B-203ENST00000492361 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
TNFRSF1B-203ENST00000492361 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
TNFRSF1B-203ENST00000492361 ITPR3Q14573 2671 aa11.38□□□□□ -0.59
TNFRSF1B-203ENST00000492361 A6NDX4 124 aa11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 U3KQE9 123 aa11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 CD28P10747 220 aa11.37□□□□□ -0.59
TNFRSF1B-203ENST00000492361 TOMM6Q96B49 74 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms