RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GCGP01275 180 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 HNRNPA3P51991 378 aaKnown RBP8.67□□□□□ -1.02
USF1-206ENST00000491629 IL15RAQ13261 267 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 LAGE3Q14657 143 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 TMEM252Q8N6L7 170 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 PPP1R1CQ8WVI7 109 aa8.67□□□□□ -1.02
USF1-206ENST00000491629 LYRM2Q9NU23 88 aaPredicted RBP8.67□□□□□ -1.02
USF1-206ENST00000491629 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 TYMSP04818 313 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 NDUFA6P56556 154 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 KHDC3LQ587J8 217 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 LELP1Q5T871 98 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 FAM159AQ6UWV7 190 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 CHAC1Q9BUX1 264 aa8.66□□□□□ -1.02
USF1-206ENST00000491629 DIRC3C9JPN6 131 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 ZNF25P17030 456 aaPredicted RBP8.65□□□□□ -1.02
USF1-206ENST00000491629 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
USF1-206ENST00000491629 TMED6Q8WW62 240 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 TVP23CQ96ET8 276 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 DNAJC30Q96LL9 226 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 TM2D2Q9BX73 214 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 NAGKQ9UJ70 344 aa8.65□□□□□ -1.02
USF1-206ENST00000491629 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
USF1-206ENST00000491629 RAB32Q13637 225 aa8.64□□□□□ -1.03
USF1-206ENST00000491629 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
USF1-206ENST00000491629 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
USF1-206ENST00000491629 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
USF1-206ENST00000491629 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
USF1-206ENST00000491629 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
USF1-206ENST00000491629 TNXBP22105 4242 aa8.64□□□□□ -1.03
USF1-206ENST00000491629 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
USF1-206ENST00000491629 C9JQL5 133 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 RS1O15537 224 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
USF1-206ENST00000491629 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 Q9UF83 564 aa8.63□□□□□ -1.03
USF1-206ENST00000491629 TRBV6-4A0A1B0GX49 114 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 M0R036 132 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 PET100P0DJ07 73 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 S100A10P60903 97 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 ATP6V1FQ16864 119 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 SNHG12Q9BXW3 62 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
USF1-206ENST00000491629 B4DEV8 164 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 F6UZH7 168 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 CIDEAO60543 219 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 G0S2P27469 103 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 CSN1S1P47710 185 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 HBG1P69891 147 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 HBG2P69892 147 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 RHOHQ15669 191 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 ZNF664Q8N3J9 261 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
USF1-206ENST00000491629 TRAV8-3A0A0A6YYJ7 113 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 UMAD1C9J7I0 102 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 OR7C2O60412 319 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 IGLV2-8P01709 118 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 GZMBP10144 247 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 ZNF674Q2M3X9 581 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 OR5C1Q8NGR4 320 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 HIST1H2BLQ99880 126 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 PRADC1Q9BSG0 188 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
USF1-206ENST00000491629 TRAV21A0A0B4J279 112 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 RBFOX3A6NFN3 312 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 PGPEP1LA6NFU8 196 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 PHOX2AO14813 284 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
USF1-206ENST00000491629 TMEM241Q24JQ0 296 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 C9orf85Q96MD7 179 aa8.59□□□□□ -1.03
USF1-206ENST00000491629 AKR1C3P42330 323 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms