RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 KCNIP4Q6PIL6 250 aa13.11□□□□□ -0.31
SREBF1-216ENST00000490796 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
SREBF1-216ENST00000490796 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
SREBF1-216ENST00000490796 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
SREBF1-216ENST00000490796 LECT2O14960 151 aa13.1□□□□□ -0.31
SREBF1-216ENST00000490796 LINC00694P0DN24 101 aa13.1□□□□□ -0.31
SREBF1-216ENST00000490796 CST9LP1Q5W188 147 aa13.1□□□□□ -0.31
SREBF1-216ENST00000490796 SRRM2Q9UQ35 2752 aaKnown RBP13.1□□□□□ -0.31
SREBF1-216ENST00000490796 M0R381 172 aa13.09□□□□□ -0.31
SREBF1-216ENST00000490796 C1QBP02746 253 aa13.09□□□□□ -0.31
SREBF1-216ENST00000490796 CRIP1P50238 77 aa13.09□□□□□ -0.31
SREBF1-216ENST00000490796 DNLZQ5SXM8 178 aa13.09□□□□□ -0.31
SREBF1-216ENST00000490796 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
SREBF1-216ENST00000490796 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-216ENST00000490796 A0A087WWL8 130 aa13.08□□□□□ -0.32
SREBF1-216ENST00000490796 ARPC5O15511 151 aa13.08□□□□□ -0.32
SREBF1-216ENST00000490796 ZFP82Q8N141 532 aa13.08□□□□□ -0.32
SREBF1-216ENST00000490796 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
SREBF1-216ENST00000490796 Q9UF83 564 aa13.08□□□□□ -0.32
SREBF1-216ENST00000490796 A0A087WX48 190 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 AKR1C3P42330 323 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 RPL36AP83881 106 aaKnown RBP13.07□□□□□ -0.32
SREBF1-216ENST00000490796 WFDC2Q14508 124 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 COX8CQ7Z4L0 72 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 RPL36ALQ969Q0 106 aaKnown RBP13.07□□□□□ -0.32
SREBF1-216ENST00000490796 SFRP2Q96HF1 295 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 FAM30AQ9NZY2 134 aa13.07□□□□□ -0.32
SREBF1-216ENST00000490796 IGKV2D-24A0A075B6R9 120 aa13.06□□□□□ -0.32
SREBF1-216ENST00000490796 FHITP49789 147 aa13.06□□□□□ -0.32
SREBF1-216ENST00000490796 ELOBQ15370 118 aa13.06□□□□□ -0.32
SREBF1-216ENST00000490796 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
SREBF1-216ENST00000490796 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
SREBF1-216ENST00000490796 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
SREBF1-216ENST00000490796 NIT1Q86X76 327 aa13.05□□□□□ -0.32
SREBF1-216ENST00000490796 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
SREBF1-216ENST00000490796 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 LTAP01374 205 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 PLA2G1BP04054 148 aaKnown RBP13.04□□□□□ -0.32
SREBF1-216ENST00000490796 Q8N976 141 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
SREBF1-216ENST00000490796 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-216ENST00000490796 CYTL1Q9NRR1 136 aa13.03□□□□□ -0.32
SREBF1-216ENST00000490796 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
SREBF1-216ENST00000490796 MYCBP2O75592 4640 aa13.03□□□□□ -0.32
SREBF1-216ENST00000490796 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
SREBF1-216ENST00000490796 J3QL48 77 aa13.02□□□□□ -0.33
SREBF1-216ENST00000490796 PAGE4O60829 102 aa13.02□□□□□ -0.33
SREBF1-216ENST00000490796 S100A9P06702 114 aaKnown RBP13.02□□□□□ -0.33
SREBF1-216ENST00000490796 CHCHD7Q9BUK0 85 aa13.02□□□□□ -0.33
SREBF1-216ENST00000490796 TRBV7-3A0A075B6L6 115 aa13.01□□□□□ -0.33
SREBF1-216ENST00000490796 PFDN1O60925 122 aa13.01□□□□□ -0.33
SREBF1-216ENST00000490796 RGS21Q2M5E4 152 aa13.01□□□□□ -0.33
SREBF1-216ENST00000490796 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
SREBF1-216ENST00000490796 Q0VG73 95 aa13□□□□□ -0.33
SREBF1-216ENST00000490796 ZNF56Q15929 161 aa13□□□□□ -0.33
SREBF1-216ENST00000490796 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
SREBF1-216ENST00000490796 A0A1B0GV50 99 aa12.99□□□□□ -0.33
SREBF1-216ENST00000490796 G3V3Q6 166 aa12.99□□□□□ -0.33
SREBF1-216ENST00000490796 UBE2D3P61077 147 aa12.99□□□□□ -0.33
SREBF1-216ENST00000490796 UBE2D2P62837 147 aa12.99□□□□□ -0.33
SREBF1-216ENST00000490796 LINC00528Q8N1L1 170 aa12.99□□□□□ -0.33
SREBF1-216ENST00000490796 ZNF471Q9BX82 626 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-216ENST00000490796 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
SREBF1-216ENST00000490796 CRPP02741 224 aa12.98□□□□□ -0.33
SREBF1-216ENST00000490796 RAB4BP61018 213 aa12.98□□□□□ -0.33
SREBF1-216ENST00000490796 Q6ZSA8 131 aa12.98□□□□□ -0.33
SREBF1-216ENST00000490796 BAGE2Q86Y30 109 aa12.98□□□□□ -0.33
SREBF1-216ENST00000490796 SMLR1H3BR10 107 aa12.97□□□□□ -0.33
SREBF1-216ENST00000490796 LINC01620Q4KN68 170 aa12.97□□□□□ -0.33
SREBF1-216ENST00000490796 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
SREBF1-216ENST00000490796 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
SREBF1-216ENST00000490796 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
SREBF1-216ENST00000490796 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 F5H697 171 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
SREBF1-216ENST00000490796 C14orf177Q52M58 125 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 PRR27Q6MZM9 219 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.33
SREBF1-216ENST00000490796 CXCL1P09341 107 aa12.95□□□□□ -0.34
SREBF1-216ENST00000490796 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
SREBF1-216ENST00000490796 PKIAP61925 76 aa12.95□□□□□ -0.34
SREBF1-216ENST00000490796 ZNF345Q14585 488 aa12.95□□□□□ -0.34
SREBF1-216ENST00000490796 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
SREBF1-216ENST00000490796 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
SREBF1-216ENST00000490796 SSTP61278 116 aa12.94□□□□□ -0.34
SREBF1-216ENST00000490796 C15orf54Q8N8G6 183 aa12.94□□□□□ -0.34
SREBF1-216ENST00000490796 NEXN-AS1Q8NBZ9 246 aa12.94□□□□□ -0.34
SREBF1-216ENST00000490796 CHCHD5Q9BSY4 110 aa12.94□□□□□ -0.34
SREBF1-216ENST00000490796 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
SREBF1-216ENST00000490796 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
SREBF1-216ENST00000490796 ANGP03950 147 aaKnown RBP12.93□□□□□ -0.34
SREBF1-216ENST00000490796 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
SREBF1-216ENST00000490796 EIF5AP63241 154 aaKnown RBP12.93□□□□□ -0.34
SREBF1-216ENST00000490796 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
SREBF1-216ENST00000490796 DEFB104AQ8WTQ1 72 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms