RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 RS1O15537 224 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 TMEM141Q96I45 108 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 GATD1Q8NB37 220 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 CHD8Q9HCK8 2581 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 LINC01548A6NM66 108 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
SHOX2-205ENST00000490689 CRYGBP07316 175 aa9.85□□□□□ -0.83
SHOX2-205ENST00000490689 NPBQ8NG41 125 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 PIMREGQ9BSJ6 248 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 YAE1D1Q9NRH1 226 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 C11orf21Q9P2W6 132 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 UBE2E1P51965 193 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 NDUFA11Q86Y39 141 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 Q8N9W7 124 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 TOMM6Q96B49 74 aa9.84□□□□□ -0.83
SHOX2-205ENST00000490689 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
SHOX2-205ENST00000490689 DAND5Q8N907 189 aa9.83□□□□□ -0.84
SHOX2-205ENST00000490689 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
SHOX2-205ENST00000490689 SYNJ2BPP57105 145 aa9.83□□□□□ -0.84
SHOX2-205ENST00000490689 ADAMTS20P59510 1910 aa9.83□□□□□ -0.84
SHOX2-205ENST00000490689 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 C11orf44Q8N8P7 122 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 RASL10AQ92737 203 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 EDA2RQ9HAV5 297 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 TNRC6BQ9UPQ9 1833 aaKnown RBP9.82□□□□□ -0.84
SHOX2-205ENST00000490689 MSRB2Q9Y3D2 182 aa9.82□□□□□ -0.84
SHOX2-205ENST00000490689 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 UNQ9165/PRO28630Q6UXU0 137 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 I3L3M4 83 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
SHOX2-205ENST00000490689 XGP55808 180 aa9.81□□□□□ -0.84
SHOX2-205ENST00000490689 TRBV12-3P01733 135 aa9.8□□□□□ -0.84
SHOX2-205ENST00000490689 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
SHOX2-205ENST00000490689 C11orf68Q9H3H3 251 aaKnown RBP9.8□□□□□ -0.84
SHOX2-205ENST00000490689 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
SHOX2-205ENST00000490689 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
SHOX2-205ENST00000490689 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
SHOX2-205ENST00000490689 LY6DQ14210 128 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 EYSQ5T1H1 3165 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 ZFP36P26651 326 aaKnown RBP9.79□□□□□ -0.84
SHOX2-205ENST00000490689 C9orf47Q6ZRZ4 202 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 LINC00158P58513 81 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 CCL19Q99731 98 aa9.79□□□□□ -0.84
SHOX2-205ENST00000490689 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
SHOX2-205ENST00000490689 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 NDUFA4O00483 81 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 TCTEX1D4Q5JR98 221 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 USMG5Q96IX5 58 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 UBE2E2Q96LR5 201 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 SPTBN4Q9H254 2564 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 DEFB131AP59861 70 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 NRACQ8N912 160 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 HIVEP3Q5T1R4 2406 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 CENPVL3A0A0U1RRI6 287 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
SHOX2-205ENST00000490689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
SHOX2-205ENST00000490689 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
SHOX2-205ENST00000490689 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
SHOX2-205ENST00000490689 A0A1W2PRX2 142 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 BLCAPP62952 87 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
SHOX2-205ENST00000490689 TRGV2A0A075B6R0 118 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 IGHV1-69DA0A0B4J2H0 117 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 A0A0J9YY99 117 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 SPATA25Q9BR10 227 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 HIST1H4AP62805 103 aaKnown RBP9.77□□□□□ -0.85
SHOX2-205ENST00000490689 Q6ZS46 218 aa9.77□□□□□ -0.85
SHOX2-205ENST00000490689 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 TRGV1A0A0A0MS02 117 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 C16orf54Q6UWD8 224 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 PIP4P1Q86T03 277 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 Q8N1Y9 231 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 MRPL53Q96EL3 112 aaKnown RBP9.76□□□□□ -0.85
SHOX2-205ENST00000490689 MGAQ8IWI9 3026 aa9.76□□□□□ -0.85
SHOX2-205ENST00000490689 PRR9Q5T870 116 aa9.75□□□□□ -0.85
SHOX2-205ENST00000490689 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
SHOX2-205ENST00000490689 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
SHOX2-205ENST00000490689 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
SHOX2-205ENST00000490689 LEPROTO15243 131 aa9.75□□□□□ -0.85
SHOX2-205ENST00000490689 PAX4O43316 350 aa9.75□□□□□ -0.85
SHOX2-205ENST00000490689 C20orf173Q96LM9 149 aa9.74□□□□□ -0.85
SHOX2-205ENST00000490689 COL4A2P08572 1712 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms