RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NXPH4O95158 308 aa11.36□□□□□ -0.59
PCCB-218ENST00000490504 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
PCCB-218ENST00000490504 MUC4Q99102 2169 aa11.36□□□□□ -0.59
PCCB-218ENST00000490504 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 PPBPP02775 128 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 EVI2AP22794 236 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 CKS2P33552 79 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 TRPT1Q86TN4 253 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 NIT1Q86X76 327 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 TRGV11A0A075B6L2 103 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 RBMY1A1P0DJD3 496 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 RBMY1CP0DJD4 496 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 RBMY1FQ15415 496 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 CHCHD1Q96BP2 118 aaKnown RBP11.35□□□□□ -0.59
PCCB-218ENST00000490504 C9orf85Q96MD7 179 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
PCCB-218ENST00000490504 SPRY2O43597 315 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 HSBP1O75506 76 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 INSP01308 110 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 PMCHP20382 165 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 AMTP48728 403 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 APOC4P55056 127 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 URB1-AS1Q96HZ7 61 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
PCCB-218ENST00000490504 SMKR1H3BMG3 65 aa11.33□□□□□ -0.6
PCCB-218ENST00000490504 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
PCCB-218ENST00000490504 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
PCCB-218ENST00000490504 Q6ZWC4 215 aa11.33□□□□□ -0.6
PCCB-218ENST00000490504 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
PCCB-218ENST00000490504 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 CBY3A6NI87 242 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 NCR2O95944 276 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 LINC00614P0C842 121 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 S100A12P80511 92 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 KIR2DL5BQ8NHK3 375 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 LINC00467Q9BRT7 94 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 MDFICQ9P1T7 246 aa11.32□□□□□ -0.6
PCCB-218ENST00000490504 LCE6AA0A183 80 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
PCCB-218ENST00000490504 IL17DQ8TAD2 202 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 TP53TG1Q9Y2A0 90 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 NPYP01303 97 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
PCCB-218ENST00000490504 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 PRSS3P2Q8NHM4 247 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 RNF183Q96D59 192 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
PCCB-218ENST00000490504 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
PCCB-218ENST00000490504 XCL2Q9UBD3 114 aa11.3□□□□□ -0.6
PCCB-218ENST00000490504 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 A0A0J9YWU9 116 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
PCCB-218ENST00000490504 LINC01587Q99440 93 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 ALMS1Q8TCU4 4167 aa11.29□□□□□ -0.6
PCCB-218ENST00000490504 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
PCCB-218ENST00000490504 TNFRSF6BO95407 300 aa11.28□□□□□ -0.6
PCCB-218ENST00000490504 SMIM17P0DL12 118 aa11.28□□□□□ -0.6
PCCB-218ENST00000490504 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
PCCB-218ENST00000490504 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
PCCB-218ENST00000490504 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 GAS8-AS1O95177 125 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 HTN1P15515 57 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 ZNF415Q09FC8 603 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 NIT2Q9NQR4 276 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.6
PCCB-218ENST00000490504 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
PCCB-218ENST00000490504 MGPP08493 103 aa11.27□□□□□ -0.61
PCCB-218ENST00000490504 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
PCCB-218ENST00000490504 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
PCCB-218ENST00000490504 NRACQ8N912 160 aa11.27□□□□□ -0.61
PCCB-218ENST00000490504 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.61
PCCB-218ENST00000490504 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
PCCB-218ENST00000490504 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
PCCB-218ENST00000490504 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
PCCB-218ENST00000490504 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
PCCB-218ENST00000490504 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
PCCB-218ENST00000490504 JPT2Q9H910 190 aa11.25□□□□□ -0.61
PCCB-218ENST00000490504 NXT2Q9NPJ8 142 aaKnown RBP11.25□□□□□ -0.61
PCCB-218ENST00000490504 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 LINC00315P59091 139 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 KRTDAPP60985 99 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 CDPF1Q6NVV7 123 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
PCCB-218ENST00000490504 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 C11orf72Q8NBR9 251 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 PTH2Q96A98 100 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 SPXQ9BT56 116 aa11.24□□□□□ -0.61
PCCB-218ENST00000490504 A0A087WWL8 130 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 M0R2P5 195 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms