RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GAGE12BA1L429 117 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 GAGE7O76087 117 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 MT-ND6P03923 174 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 GAGE12FP0CL80 117 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 GAGE12GP0CL81 117 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 GAGE12IP0CL82 117 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 LINC00315P59091 139 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 CFAP126Q5VTH2 177 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
CLDN11-208ENST00000488989 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 CIDEAO60543 219 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 RAB5AP20339 215 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 FAM104BQ5XKR9 115 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 C14orf178Q8N769 122 aaPredicted RBP11.38□□□□□ -0.59
CLDN11-208ENST00000488989 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
CLDN11-208ENST00000488989 RHODO00212 210 aa11.37□□□□□ -0.59
CLDN11-208ENST00000488989 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
CLDN11-208ENST00000488989 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
CLDN11-208ENST00000488989 SMIM17P0DL12 118 aa11.36□□□□□ -0.59
CLDN11-208ENST00000488989 RAB4AP20338 218 aa11.36□□□□□ -0.59
CLDN11-208ENST00000488989 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
CLDN11-208ENST00000488989 OR4C5Q8NGB2 326 aa11.36□□□□□ -0.59
CLDN11-208ENST00000488989 FRZBQ92765 325 aa11.36□□□□□ -0.59
CLDN11-208ENST00000488989 TRGV2A0A075B6R0 118 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 A0A087WWL8 130 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
CLDN11-208ENST00000488989 RAB4BP61018 213 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 DAD1P61803 113 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 SLAQ13239 276 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
CLDN11-208ENST00000488989 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
CLDN11-208ENST00000488989 MRPL51Q4U2R6 128 aaKnown RBP11.34□□□□□ -0.59
CLDN11-208ENST00000488989 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
CLDN11-208ENST00000488989 MRPL18Q9H0U6 180 aaKnown RBP11.34□□□□□ -0.59
CLDN11-208ENST00000488989 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
CLDN11-208ENST00000488989 PHOX2AO14813 284 aa11.33□□□□□ -0.6
CLDN11-208ENST00000488989 APCSP02743 223 aa11.33□□□□□ -0.6
CLDN11-208ENST00000488989 FAM74A4Q5TZK3 123 aa11.33□□□□□ -0.6
CLDN11-208ENST00000488989 IGHV3-53P01767 116 aa11.32□□□□□ -0.6
CLDN11-208ENST00000488989 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
CLDN11-208ENST00000488989 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
CLDN11-208ENST00000488989 U3KQK5 164 aa11.32□□□□□ -0.6
CLDN11-208ENST00000488989 PPBPP02775 128 aa11.31□□□□□ -0.6
CLDN11-208ENST00000488989 TRGC2P03986 189 aa11.31□□□□□ -0.6
CLDN11-208ENST00000488989 MGPP08493 103 aa11.31□□□□□ -0.6
CLDN11-208ENST00000488989 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-208ENST00000488989 FHL2Q14192 279 aa11.31□□□□□ -0.6
CLDN11-208ENST00000488989 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
CLDN11-208ENST00000488989 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
CLDN11-208ENST00000488989 ATP5G1P05496 136 aa11.3□□□□□ -0.6
CLDN11-208ENST00000488989 ZNF56Q15929 161 aa11.3□□□□□ -0.6
CLDN11-208ENST00000488989 SUMO4Q6EEV6 95 aa11.3□□□□□ -0.6
CLDN11-208ENST00000488989 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-208ENST00000488989 M0QY20 66 aa11.29□□□□□ -0.6
CLDN11-208ENST00000488989 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
CLDN11-208ENST00000488989 Q6ZSN1 163 aa11.29□□□□□ -0.6
CLDN11-208ENST00000488989 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
CLDN11-208ENST00000488989 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 D6R8Y8 96 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 F5H697 171 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 HOXA5P20719 270 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 CKS2P33552 79 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 FBN3Q75N90 2809 aa11.28□□□□□ -0.6
CLDN11-208ENST00000488989 STAB2Q8WWQ8 2551 aa11.27□□□□□ -0.6
CLDN11-208ENST00000488989 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 SMKR1H3BMG3 65 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 H7C1H1 209 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 GAS8-AS1O95177 125 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 NANOS2P60321 138 aaKnown RBP11.27□□□□□ -0.61
CLDN11-208ENST00000488989 Q6ZTC4 211 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 NRACQ8N912 160 aa11.27□□□□□ -0.61
CLDN11-208ENST00000488989 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.61
CLDN11-208ENST00000488989 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 K7EQD1 137 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 NCR2O95944 276 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 PPP1R17O96001 155 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 SLC25A29Q8N8R3 303 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 PRO0255Q9UI72 69 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 DNAH7Q8WXX0 4024 aa11.26□□□□□ -0.61
CLDN11-208ENST00000488989 CRYBA4P53673 196 aa11.25□□□□□ -0.61
CLDN11-208ENST00000488989 RHOHQ15669 191 aa11.25□□□□□ -0.61
CLDN11-208ENST00000488989 NIT2Q9NQR4 276 aa11.25□□□□□ -0.61
CLDN11-208ENST00000488989 HHLA3Q9XRX5 114 aa11.25□□□□□ -0.61
CLDN11-208ENST00000488989 DYNC2H1Q8NCM8 4307 aaKnown RBP11.24□□□□□ -0.61
CLDN11-208ENST00000488989 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
CLDN11-208ENST00000488989 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
CLDN11-208ENST00000488989 NPYP01303 97 aa11.24□□□□□ -0.61
CLDN11-208ENST00000488989 SRIP30626 198 aa11.24□□□□□ -0.61
CLDN11-208ENST00000488989 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
CLDN11-208ENST00000488989 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms