RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PITX3O75364 302 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 PYYP10082 97 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 SLC25A6P12236 298 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 GUCA1AP43080 201 aaPredicted RBP0.42□□□□□ -2.34
CD46-215ENST00000488596 SPINT3P49223 89 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 RRAS2P62070 204 aaPredicted RBP0.42□□□□□ -2.34
CD46-215ENST00000488596 SPCS2Q15005 226 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 SPANXN1Q5VSR9 72 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 SLC48A1Q6P1K1 146 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 SCIMPQ6UWF3 145 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 NDUFA11Q86Y39 141 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 KCNRGQ8N5I3 272 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 LINC00208Q96KT6 92 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 CCDC167Q9P0B6 97 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 NDUFA12Q9UI09 145 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 CUL7Q14999 1698 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 LOC285556D6RIA3 1793 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 EIF4G3O43432 1585 aaKnown RBP0.41□□□□□ -2.34
CD46-215ENST00000488596 MYO7AQ13402 2215 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 DAPK1P53355 1430 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 K7EP13 123 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 GNG7O60262 68 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 IL5P05113 134 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 PIRTP0C851 137 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
CD46-215ENST00000488596 EMX2Q04743 252 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 KLKP1Q107X0 134 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 ZNF56Q15929 161 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 OR2T2Q6IF00 324 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 C10orf99Q6UWK7 81 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 CYP2G1PQ6ZSU1 146 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 C1orf54Q8WWF1 131 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 IFI27L1Q96BM0 104 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 SDF2Q99470 211 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 PDCD10Q9BUL8 212 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 LINC00470Q9BZP3 86 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 IBTKQ9P2D0 1353 aaPredicted RBP0.41□□□□□ -2.34
CD46-215ENST00000488596 TNS1Q9HBL0 1735 aaKnown RBP0.41□□□□□ -2.34
CD46-215ENST00000488596 CFTRP13569 1480 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 BCL9LQ86UU0 1499 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 MBD5Q9P267 1494 aa0.41□□□□□ -2.34
CD46-215ENST00000488596 SIPA1L3O60292 1781 aaPredicted RBP0.4□□□□□ -2.35
CD46-215ENST00000488596 RBBP6Q7Z6E9 1792 aaKnown RBP0.4□□□□□ -2.35
CD46-215ENST00000488596 TANC1Q9C0D5 1861 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TRAV12-2A0A075B6T6 113 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TRAV12-3A0A0B4J271 114 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 FAM92AA1XBS5 289 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 EFCAB10A6NFE3 127 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 SNCGO76070 127 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 LY6G6CO95867 125 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 FXYD6P3P58550 94 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 NPC2P61916 151 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 SELENOWP63302 87 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 SPINK13Q1W4C9 94 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 SPINK9Q5DT21 86 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 C6orf52Q5T4I8 152 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 RPL7L1Q6DKI1 246 aaKnown RBP0.4□□□□□ -2.35
CD46-215ENST00000488596 RPL13AP3Q6NVV1 102 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 PPP1R1CQ8WVI7 109 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 COPS9Q8WXC6 57 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 PLAC4Q8WY50 150 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 SPTSSAQ969W0 71 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TMEM141Q96I45 108 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 DSCR8Q96T75 97 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TMEM14BQ9NUH8 114 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TMEM242Q9NWH2 141 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 COA4Q9NYJ1 87 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 PATJQ8NI35 1801 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 DOCK2Q92608 1830 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 TCHHQ07283 1943 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 CADP27708 2225 aa0.4□□□□□ -2.35
CD46-215ENST00000488596 NAIPQ13075 1403 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 DOCK11Q5JSL3 2073 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 KDM6BO15054 1643 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 SYNE2Q8WXH0 6885 aaKnown RBP0.39□□□□□ -2.35
CD46-215ENST00000488596 A6NIN4 97 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 NDUFB6O95139 128 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 IFNA17P01571 189 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 ZNF137PP52743 207 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 RPL37P61927 97 aaKnown RBP0.39□□□□□ -2.35
CD46-215ENST00000488596 S100A7L2Q5SY68 101 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 TSKUQ8WUA8 353 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 C10orf82Q8WW14 230 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 DPH3Q96FX2 82 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 SNRNP25Q9BV90 132 aaKnown RBP0.39□□□□□ -2.35
CD46-215ENST00000488596 RPRMQ9NS64 109 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 BET1LQ9NYM9 111 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 ROCK2O75116 1388 aaKnown RBP0.39□□□□□ -2.35
CD46-215ENST00000488596 ZNF518AQ6AHZ1 1483 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 QRICH2Q9H0J4 1663 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 DOCK1Q14185 1865 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 CACNA1HO95180 2353 aa0.39□□□□□ -2.35
CD46-215ENST00000488596 PI4KAP42356 2102 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 WDR7Q9Y4E6 1490 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 TRBV10-3A0A0K0K1G6 114 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 RBAKDNA6NC62 111 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 APODP05090 189 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 HIST1H1DP16402 221 aaKnown RBP0.38□□□□□ -2.35
CD46-215ENST00000488596 CCL3L1P16619 93 aa0.38□□□□□ -2.35
CD46-215ENST00000488596 CBLN1P23435 193 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 302.4 ms