RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 LINC00310P59036 64 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 RNASEKQ6P5S7 137 aaKnown RBP4.48□□□□□ -1.69
VAMP3-203ENST00000487194 FA2HQ7L5A8 372 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 C14orf178Q8N769 122 aaPredicted RBP4.48□□□□□ -1.69
VAMP3-203ENST00000487194 POM121L12Q8N7R1 296 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 C11orf72Q8NBR9 251 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 OR10D4PQ8NGN7 298 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 TMEM263Q8WUH6 116 aaKnown RBP4.48□□□□□ -1.69
VAMP3-203ENST00000487194 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
VAMP3-203ENST00000487194 NXT2Q9NPJ8 142 aaKnown RBP4.48□□□□□ -1.69
VAMP3-203ENST00000487194 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 VWFP04275 2813 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 SMIM9A6NGZ8 99 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 F5H697 171 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 SMKR1H3BMG3 65 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 RHODO00212 210 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 SPRY2O43597 315 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 NUPR1O60356 82 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 NCR2O95944 276 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 NPYP01303 97 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 AMTP48728 403 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 RRN3P1Q2M238 152 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 ZNF705AQ6ZN79 300 aaPredicted RBP4.47□□□□□ -1.69
VAMP3-203ENST00000487194 CSNK1G2-AS1Q8NCQ2 148 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 MDFIQ99750 246 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 C20orf78Q9BR46 151 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 AP5S1Q9NUS5 200 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 KIF25-AS1Q9Y6Z4 181 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 MUC4Q99102 2169 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 NBEAL2Q6ZNJ1 2754 aa4.47□□□□□ -1.69
VAMP3-203ENST00000487194 A0A087WWL8 130 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 H7C1H1 209 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 K7EMI3 77 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 CRYGDP07320 174 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 AZU1P20160 251 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 IFI27P40305 119 aaPredicted RBP4.46□□□□□ -1.7
VAMP3-203ENST00000487194 LINC00315P59091 139 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 EGFEM1PQ0D2K5 195 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 DAZ2Q13117 558 aaKnown RBP4.46□□□□□ -1.7
VAMP3-203ENST00000487194 LGALS9BQ3B8N2 356 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 Q8N8P6 123 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 NRACQ8N912 160 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 RNASE8Q8TDE3 154 aaKnown RBP4.46□□□□□ -1.7
VAMP3-203ENST00000487194 RASL10AQ92737 203 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 EDA2RQ9HAV5 297 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 ANK2Q01484 3957 aa4.46□□□□□ -1.7
VAMP3-203ENST00000487194 TRAV26-2A0A0B4J265 109 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 LINC01546A6NGU7 62 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 RS1O15537 224 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 CIDEAO60543 219 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 LEPROTL1O95214 131 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 PRM2P04554 102 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 GATA1P15976 413 aaPredicted RBP4.45□□□□□ -1.7
VAMP3-203ENST00000487194 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
VAMP3-203ENST00000487194 RPL32P62910 135 aaKnown RBP4.45□□□□□ -1.7
VAMP3-203ENST00000487194 ZNF56Q15929 161 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 OXLD1Q5BKU9 147 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 FAM74A4Q5TZK3 123 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 ZFP2Q6ZN57 461 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 OVOL2Q9BRP0 275 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 JPT2Q9H910 190 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 HSPB8Q9UJY1 196 aa4.45□□□□□ -1.7
VAMP3-203ENST00000487194 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 TRBV6-5A0A0K0K1A5 114 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 A8MZ25 164 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 VCYO14598 125 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 TCAPO15273 167 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 GAS8-AS1O95177 125 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 HBDP02042 147 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 G0S2P27469 103 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 JOSD1Q15040 202 aaPredicted RBP4.44□□□□□ -1.7
VAMP3-203ENST00000487194 ORMDL2Q53FV1 153 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 CFAP126Q5VTH2 177 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 Q6ZWC4 215 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 OR4C5Q8NGB2 326 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
VAMP3-203ENST00000487194 C12orf57Q99622 126 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
VAMP3-203ENST00000487194 MRPL16Q9NX20 251 aaKnown RBP4.44□□□□□ -1.7
VAMP3-203ENST00000487194 IGLV2-18A0A075B6J9 118 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 LINC01549A6NIU2 74 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 M0QY20 66 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 FCER1GP30273 86 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 KRTAP10-11P60412 298 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 KRTDAPP60985 99 aa4.43□□□□□ -1.7
VAMP3-203ENST00000487194 LAGE3Q14657 143 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms